Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC004158.1-201ENST00000564508 4319 ntBASIC6.21□□□□□ -1.42
TM4SF1P30408 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TM4SF1P30408 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.2□□□□□ -1.42
TM4SF1P30408 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TM4SF1P30408 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
TM4SF1P30408 MTCO1P15-201ENST00000529569 1526 ntBASIC6.2□□□□□ -1.42
TM4SF1P30408 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.2□□□□□ -1.42
TM4SF1P30408 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TM4SF1P30408 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.2□□□□□ -1.42
TM4SF1P30408 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
TM4SF1P30408 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TM4SF1P30408 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TM4SF1P30408 AP000547.3-204ENST00000588548 2523 ntBASIC6.2□□□□□ -1.42
TM4SF1P30408 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TM4SF1P30408 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
TM4SF1P30408 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.2□□□□□ -1.42
TM4SF1P30408 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TM4SF1P30408 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
TM4SF1P30408 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TM4SF1P30408 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
TM4SF1P30408 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TM4SF1P30408 RNU6-564P-201ENST00000410983 104 ntBASIC6.2□□□□□ -1.42
TM4SF1P30408 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.2□□□□□ -1.42
TM4SF1P30408 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.2□□□□□ -1.42
TM4SF1P30408 RPL7AP49-201ENST00000429522 581 ntBASIC6.2□□□□□ -1.42
TM4SF1P30408 AL591438.1-201ENST00000433508 581 ntBASIC6.2□□□□□ -1.42
TM4SF1P30408 CYCSP11-201ENST00000436426 315 ntBASIC6.2□□□□□ -1.42
TM4SF1P30408 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.2□□□□□ -1.42
TM4SF1P30408 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.2□□□□□ -1.42
TM4SF1P30408 HMGB1P4-201ENST00000455362 567 ntBASIC6.2□□□□□ -1.42
TM4SF1P30408 RPS5P7-201ENST00000456664 608 ntBASIC6.2□□□□□ -1.42
TM4SF1P30408 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TM4SF1P30408 AC013356.1-201ENST00000489027 564 ntBASIC6.2□□□□□ -1.42
TM4SF1P30408 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.2□□□□□ -1.42
TM4SF1P30408 IMPA1P1-201ENST00000510718 842 ntBASIC6.2□□□□□ -1.42
TM4SF1P30408 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.2□□□□□ -1.42
TM4SF1P30408 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.2□□□□□ -1.42
TM4SF1P30408 AC068831.4-201ENST00000556118 109 ntBASIC6.2□□□□□ -1.42
TM4SF1P30408 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.2□□□□□ -1.42
TM4SF1P30408 AC023389.2-201ENST00000580031 955 ntBASIC6.2□□□□□ -1.42
TM4SF1P30408 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.2□□□□□ -1.42
TM4SF1P30408 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.2□□□□□ -1.42
TM4SF1P30408 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.2□□□□□ -1.42
TM4SF1P30408 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.2□□□□□ -1.42
TM4SF1P30408 MIR6133-201ENST00000617057 108 ntBASIC6.2□□□□□ -1.42
TM4SF1P30408 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
TM4SF1P30408 AC239868.2-201ENST00000564237 4527 ntBASIC6.2□□□□□ -1.42
TM4SF1P30408 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
TM4SF1P30408 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TM4SF1P30408 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
TM4SF1P30408 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TM4SF1P30408 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TM4SF1P30408 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
TM4SF1P30408 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.2□□□□□ -1.42
TM4SF1P30408 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.2□□□□□ -1.42
TM4SF1P30408 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.19□□□□□ -1.42
TM4SF1P30408 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF1P30408 AC091046.3-201ENST00000631455 1574 ntBASIC6.19□□□□□ -1.42
TM4SF1P30408 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF1P30408 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.19□□□□□ -1.42
TM4SF1P30408 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF1P30408 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
TM4SF1P30408 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.19□□□□□ -1.42
TM4SF1P30408 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.19□□□□□ -1.42
TM4SF1P30408 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
TM4SF1P30408 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TM4SF1P30408 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF1P30408 RNA5SP515-201ENST00000364570 118 ntBASIC6.19□□□□□ -1.42
TM4SF1P30408 MIR1193-201ENST00000408109 78 ntBASIC6.19□□□□□ -1.42
TM4SF1P30408 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.19□□□□□ -1.42
TM4SF1P30408 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.19□□□□□ -1.42
TM4SF1P30408 FAM204CP-201ENST00000424489 642 ntBASIC6.19□□□□□ -1.42
TM4SF1P30408 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.19□□□□□ -1.42
TM4SF1P30408 RPL12P28-201ENST00000430852 489 ntBASIC6.19□□□□□ -1.42
TM4SF1P30408 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.19□□□□□ -1.42
TM4SF1P30408 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.19□□□□□ -1.42
TM4SF1P30408 TXNP2-201ENST00000443918 295 ntBASIC6.19□□□□□ -1.42
TM4SF1P30408 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.19□□□□□ -1.42
TM4SF1P30408 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC6.19□□□□□ -1.42
TM4SF1P30408 BX842559.2-201ENST00000451418 605 ntBASIC6.19□□□□□ -1.42
TM4SF1P30408 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.19□□□□□ -1.42
TM4SF1P30408 RFPL4AP3-201ENST00000515267 345 ntBASIC6.19□□□□□ -1.42
TM4SF1P30408 AC018558.5-201ENST00000565840 952 ntBASIC6.19□□□□□ -1.42
TM4SF1P30408 AP005119.2-201ENST00000579735 1105 ntBASIC6.19□□□□□ -1.42
TM4SF1P30408 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.19□□□□□ -1.42
TM4SF1P30408 AC103792.1-201ENST00000603591 919 ntBASIC6.19□□□□□ -1.42
TM4SF1P30408 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.19□□□□□ -1.42
TM4SF1P30408 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.19□□□□□ -1.42
TM4SF1P30408 AC093388.1-201ENST00000609166 430 ntBASIC6.19□□□□□ -1.42
TM4SF1P30408 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF1P30408 AL118556.2-201ENST00000614375 824 ntBASIC6.19□□□□□ -1.42
TM4SF1P30408 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF1P30408 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TM4SF1P30408 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.19□□□□□ -1.42
TM4SF1P30408 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
TM4SF1P30408 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
TM4SF1P30408 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF1P30408 AC034229.2-201ENST00000566945 2508 ntBASIC6.19□□□□□ -1.42
TM4SF1P30408 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.19□□□□□ -1.42
TM4SF1P30408 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms