Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC008785.1-201ENST00000624475 456 ntBASIC5.71□□□□□ -1.5
COL4A5P29400 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL4A5P29400 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.71□□□□□ -1.5
COL4A5P29400 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
COL4A5P29400 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.71□□□□□ -1.5
COL4A5P29400 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.71□□□□□ -1.5
COL4A5P29400 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL4A5P29400 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A5P29400 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COL4A5P29400 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.7□□□□□ -1.5
COL4A5P29400 AC125257.1-201ENST00000560400 2930 ntBASIC5.7□□□□□ -1.5
COL4A5P29400 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
COL4A5P29400 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A5P29400 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.7□□□□□ -1.5
COL4A5P29400 ZNF812P-201ENST00000457674 1694 ntBASIC5.7□□□□□ -1.5
COL4A5P29400 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A5P29400 SNORA70C-201ENST00000384538 135 ntBASIC5.7□□□□□ -1.5
COL4A5P29400 RNA5SP171-201ENST00000391071 115 ntBASIC5.7□□□□□ -1.5
COL4A5P29400 SNORA48.4-201ENST00000391089 134 ntBASIC5.7□□□□□ -1.5
COL4A5P29400 RPL17P50-201ENST00000396131 546 ntBASIC5.7□□□□□ -1.5
COL4A5P29400 CASKP1-201ENST00000412870 582 ntBASIC5.7□□□□□ -1.5
COL4A5P29400 RPL36AP36-201ENST00000418616 301 ntBASIC5.7□□□□□ -1.5
COL4A5P29400 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.7□□□□□ -1.5
COL4A5P29400 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.7□□□□□ -1.5
COL4A5P29400 AC004980.3-201ENST00000447046 365 ntBASIC5.7□□□□□ -1.5
COL4A5P29400 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.7□□□□□ -1.5
COL4A5P29400 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.7□□□□□ -1.5
COL4A5P29400 AC025884.1-201ENST00000556034 378 ntBASIC5.7□□□□□ -1.5
COL4A5P29400 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.7□□□□□ -1.5
COL4A5P29400 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A5P29400 AC034229.2-201ENST00000566945 2508 ntBASIC5.7□□□□□ -1.5
COL4A5P29400 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.69□□□□□ -1.5
COL4A5P29400 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
COL4A5P29400 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
COL4A5P29400 ARL4AP5-201ENST00000404372 599 ntBASIC5.69□□□□□ -1.5
COL4A5P29400 RN7SKP267-201ENST00000410381 285 ntBASIC5.69□□□□□ -1.5
COL4A5P29400 TMSB10P2-201ENST00000416049 131 ntBASIC5.69□□□□□ -1.5
COL4A5P29400 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.69□□□□□ -1.5
COL4A5P29400 BX276092.6-201ENST00000430476 250 ntBASIC5.69□□□□□ -1.5
COL4A5P29400 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.69□□□□□ -1.5
COL4A5P29400 GAPDHP14-201ENST00000450472 937 ntBASIC5.69□□□□□ -1.5
COL4A5P29400 BX276092.8-201ENST00000455722 250 ntBASIC5.69□□□□□ -1.5
COL4A5P29400 RPS27AP16-201ENST00000492222 470 ntBASIC5.69□□□□□ -1.5
COL4A5P29400 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A5P29400 FCF1-203ENST00000553615 954 ntTSL 3 BASIC5.69□□□□□ -1.5
COL4A5P29400 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.69□□□□□ -1.5
COL4A5P29400 AC093227.2-201ENST00000589357 285 ntBASIC5.69□□□□□ -1.5
COL4A5P29400 AC022916.3-201ENST00000592961 742 ntBASIC5.69□□□□□ -1.5
COL4A5P29400 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.69□□□□□ -1.5
COL4A5P29400 AC243960.7-201ENST00000623532 707 ntBASIC5.69□□□□□ -1.5
COL4A5P29400 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A5P29400 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
COL4A5P29400 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A5P29400 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A5P29400 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A5P29400 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A5P29400 AC010168.2-201ENST00000562691 5428 ntBASIC5.69□□□□□ -1.5
COL4A5P29400 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A5P29400 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A5P29400 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A5P29400 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A5P29400 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A5P29400 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A5P29400 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC5.69□□□□□ -1.5
COL4A5P29400 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A5P29400 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.69□□□□□ -1.5
COL4A5P29400 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.69□□□□□ -1.5
COL4A5P29400 RPL34P6-201ENST00000432390 345 ntBASIC5.69□□□□□ -1.5
COL4A5P29400 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.69□□□□□ -1.5
COL4A5P29400 AC022034.3-201ENST00000471393 478 ntBASIC5.69□□□□□ -1.5
COL4A5P29400 AC041039.1-201ENST00000485656 536 ntBASIC5.69□□□□□ -1.5
COL4A5P29400 ENPP7P11-201ENST00000505915 627 ntBASIC5.69□□□□□ -1.5
COL4A5P29400 MED28P5-201ENST00000528254 438 ntBASIC5.69□□□□□ -1.5
COL4A5P29400 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.69□□□□□ -1.5
COL4A5P29400 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.69□□□□□ -1.5
COL4A5P29400 AL034408.1-201ENST00000637712 664 ntBASIC5.69□□□□□ -1.5
COL4A5P29400 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A5P29400 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A5P29400 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.68□□□□□ -1.5
COL4A5P29400 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A5P29400 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A5P29400 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A5P29400 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.68□□□□□ -1.5
COL4A5P29400 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.68□□□□□ -1.5
COL4A5P29400 CASC19-255ENST00000641733 1385 ntBASIC5.68□□□□□ -1.5
COL4A5P29400 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.68□□□□□ -1.5
COL4A5P29400 VN2R3P-201ENST00000422626 1412 ntBASIC5.68□□□□□ -1.5
COL4A5P29400 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COL4A5P29400 ATP5F1P2-201ENST00000398143 760 ntBASIC5.68□□□□□ -1.5
COL4A5P29400 RPS29P17-201ENST00000430795 166 ntBASIC5.68□□□□□ -1.5
COL4A5P29400 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A5P29400 MTND2P40-201ENST00000436718 841 ntBASIC5.68□□□□□ -1.5
COL4A5P29400 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.68□□□□□ -1.5
COL4A5P29400 RN7SL197P-201ENST00000466981 299 ntBASIC5.68□□□□□ -1.5
COL4A5P29400 AC015795.1-201ENST00000513669 327 ntBASIC5.68□□□□□ -1.5
COL4A5P29400 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.68□□□□□ -1.5
COL4A5P29400 AC136777.2-201ENST00000522979 358 ntBASIC5.68□□□□□ -1.5
COL4A5P29400 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.68□□□□□ -1.5
COL4A5P29400 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.68□□□□□ -1.5
COL4A5P29400 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms