Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNU6-492P-201ENST00000363035 104 ntBASIC5.58□□□□□ -1.52
CD40P25942 RNA5SP279-201ENST00000365513 117 ntBASIC5.58□□□□□ -1.52
CD40P25942 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CD40P25942 SUGT1P1-201ENST00000379514 476 ntBASIC5.58□□□□□ -1.52
CD40P25942 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CD40P25942 MIR188-201ENST00000385034 86 ntBASIC5.58□□□□□ -1.52
CD40P25942 ATP5F1P4-201ENST00000397288 746 ntBASIC5.58□□□□□ -1.52
CD40P25942 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.58□□□□□ -1.52
CD40P25942 RNA5SP198-201ENST00000410376 127 ntBASIC5.58□□□□□ -1.52
CD40P25942 PGBD4P8-201ENST00000412993 562 ntBASIC5.58□□□□□ -1.52
CD40P25942 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.58□□□□□ -1.52
CD40P25942 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.58□□□□□ -1.52
CD40P25942 RPS26P38-201ENST00000414476 348 ntBASIC5.58□□□□□ -1.52
CD40P25942 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.58□□□□□ -1.52
CD40P25942 AC234782.4-201ENST00000417646 1048 ntBASIC5.58□□□□□ -1.52
CD40P25942 BOLA3P4-201ENST00000418151 400 ntBASIC5.58□□□□□ -1.52
CD40P25942 Z99497.1-201ENST00000421282 135 ntBASIC5.58□□□□□ -1.52
CD40P25942 MTCO2P34-201ENST00000421994 607 ntBASIC5.58□□□□□ -1.52
CD40P25942 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.58□□□□□ -1.52
CD40P25942 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.58□□□□□ -1.52
CD40P25942 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.58□□□□□ -1.52
CD40P25942 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.58□□□□□ -1.52
CD40P25942 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.58□□□□□ -1.52
CD40P25942 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.58□□□□□ -1.52
CD40P25942 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.58□□□□□ -1.52
CD40P25942 AC005229.2-201ENST00000456995 399 ntBASIC5.58□□□□□ -1.52
CD40P25942 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.58□□□□□ -1.52
CD40P25942 RNU6-956P-201ENST00000458868 103 ntBASIC5.58□□□□□ -1.52
CD40P25942 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.58□□□□□ -1.52
CD40P25942 AC109486.1-201ENST00000486833 374 ntBASIC5.58□□□□□ -1.52
CD40P25942 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CD40P25942 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.58□□□□□ -1.52
CD40P25942 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.58□□□□□ -1.52
CD40P25942 AC109481.1-201ENST00000509173 282 ntBASIC5.58□□□□□ -1.52
CD40P25942 RN7SKP70-201ENST00000516655 271 ntBASIC5.58□□□□□ -1.52
CD40P25942 RNA5SP441-201ENST00000516809 88 ntBASIC5.58□□□□□ -1.52
CD40P25942 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.58□□□□□ -1.52
CD40P25942 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC5.58□□□□□ -1.52
CD40P25942 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.58□□□□□ -1.52
CD40P25942 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.58□□□□□ -1.52
CD40P25942 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CD40P25942 OR1E3-201ENST00000575608 948 ntBASIC5.58□□□□□ -1.52
CD40P25942 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.58□□□□□ -1.52
CD40P25942 AL953862.2-201ENST00000603089 820 ntBASIC5.58□□□□□ -1.52
CD40P25942 AC128687.1-201ENST00000605304 619 ntBASIC5.58□□□□□ -1.52
CD40P25942 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.58□□□□□ -1.52
CD40P25942 AL135999.3-201ENST00000610501 812 ntBASIC5.58□□□□□ -1.52
CD40P25942 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CD40P25942 AC135068.5-201ENST00000624197 983 ntBASIC5.58□□□□□ -1.52
CD40P25942 AL049536.1-201ENST00000625043 744 ntBASIC5.58□□□□□ -1.52
CD40P25942 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.58□□□□□ -1.52
CD40P25942 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.58□□□□□ -1.52
CD40P25942 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC5.58□□□□□ -1.52
CD40P25942 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CD40P25942 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD40P25942 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
CD40P25942 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
CD40P25942 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CD40P25942 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC5.58□□□□□ -1.52
CD40P25942 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD40P25942 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
CD40P25942 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD40P25942 AC105114.1-201ENST00000624795 1862 ntBASIC5.58□□□□□ -1.52
CD40P25942 AL121768.1-201ENST00000613917 2544 ntBASIC5.57□□□□□ -1.52
CD40P25942 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CD40P25942 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.57□□□□□ -1.52
CD40P25942 AC125238.2-201ENST00000430003 1440 ntBASIC5.57□□□□□ -1.52
CD40P25942 MTND5P24-201ENST00000438892 1767 ntBASIC5.57□□□□□ -1.52
CD40P25942 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CD40P25942 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.57□□□□□ -1.52
CD40P25942 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CD40P25942 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CD40P25942 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CD40P25942 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CD40P25942 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CD40P25942 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CD40P25942 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CD40P25942 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.57□□□□□ -1.52
CD40P25942 AL391262.1-201ENST00000556558 1992 ntBASIC5.57□□□□□ -1.52
CD40P25942 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CD40P25942 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
CD40P25942 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CD40P25942 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CD40P25942 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CD40P25942 RNU4-21P-201ENST00000362802 126 ntBASIC5.57□□□□□ -1.52
CD40P25942 RNU1-24P-201ENST00000364285 165 ntBASIC5.57□□□□□ -1.52
CD40P25942 RN7SKP237-201ENST00000364663 301 ntBASIC5.57□□□□□ -1.52
CD40P25942 MIR640-201ENST00000385086 96 ntBASIC5.57□□□□□ -1.52
CD40P25942 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.57□□□□□ -1.52
CD40P25942 AL136133.1-201ENST00000413694 376 ntBASIC5.57□□□□□ -1.52
CD40P25942 AC004022.2-201ENST00000413824 193 ntBASIC5.57□□□□□ -1.52
CD40P25942 MTND4LP17-201ENST00000414607 293 ntBASIC5.57□□□□□ -1.52
CD40P25942 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CD40P25942 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.57□□□□□ -1.52
CD40P25942 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.57□□□□□ -1.52
CD40P25942 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.57□□□□□ -1.52
CD40P25942 CENPIP1-201ENST00000425713 902 ntBASIC5.57□□□□□ -1.52
CD40P25942 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.57□□□□□ -1.52
CD40P25942 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.57□□□□□ -1.52
CD40P25942 GAPDHP59-201ENST00000435908 267 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms