Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC7.51□□□□□ -1.21
RFX1P22670 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.51□□□□□ -1.21
RFX1P22670 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.51□□□□□ -1.21
RFX1P22670 IGLVV-66-201ENST00000523818 341 ntBASIC7.51□□□□□ -1.21
RFX1P22670 DEFB131D-201ENST00000526803 184 ntBASIC7.51□□□□□ -1.21
RFX1P22670 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.51□□□□□ -1.21
RFX1P22670 AC118273.2-201ENST00000532092 465 ntBASIC7.51□□□□□ -1.21
RFX1P22670 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RFX1P22670 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC7.51□□□□□ -1.21
RFX1P22670 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC7.51□□□□□ -1.21
RFX1P22670 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC7.51□□□□□ -1.21
RFX1P22670 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.51□□□□□ -1.21
RFX1P22670 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC7.51□□□□□ -1.21
RFX1P22670 SERPINE4P-201ENST00000554978 281 ntBASIC7.51□□□□□ -1.21
RFX1P22670 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.51□□□□□ -1.21
RFX1P22670 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.51□□□□□ -1.21
RFX1P22670 SNORA59B-202ENST00000578183 701 ntBASIC7.51□□□□□ -1.21
RFX1P22670 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.51□□□□□ -1.21
RFX1P22670 SLC25A36P1-201ENST00000590111 465 ntBASIC7.51□□□□□ -1.21
RFX1P22670 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.51□□□□□ -1.21
RFX1P22670 SEPT7P9-203ENST00000604116 343 ntBASIC7.51□□□□□ -1.21
RFX1P22670 LARP7P1-201ENST00000605576 316 ntBASIC7.51□□□□□ -1.21
RFX1P22670 AL365181.4-201ENST00000609800 547 ntBASIC7.51□□□□□ -1.21
RFX1P22670 AC091304.9-201ENST00000612091 226 ntBASIC7.51□□□□□ -1.21
RFX1P22670 AC025253.1-201ENST00000613623 543 ntBASIC7.51□□□□□ -1.21
RFX1P22670 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.51□□□□□ -1.21
RFX1P22670 RN7SL126P-201ENST00000616400 299 ntBASIC7.51□□□□□ -1.21
RFX1P22670 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
RFX1P22670 AL356321.1-201ENST00000621360 228 ntBASIC7.51□□□□□ -1.21
RFX1P22670 AC087894.3-201ENST00000623682 349 ntBASIC7.51□□□□□ -1.21
RFX1P22670 AC015726.3-201ENST00000624501 418 ntBASIC7.51□□□□□ -1.21
RFX1P22670 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC7.51□□□□□ -1.21
RFX1P22670 OR5AK4P-201ENST00000635912 903 ntBASIC7.51□□□□□ -1.21
RFX1P22670 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RFX1P22670 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.51□□□□□ -1.21
RFX1P22670 AP003486.1-201ENST00000525716 3994 ntBASIC7.51□□□□□ -1.21
RFX1P22670 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
RFX1P22670 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RFX1P22670 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.51□□□□□ -1.21
RFX1P22670 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.51□□□□□ -1.21
RFX1P22670 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
RFX1P22670 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RFX1P22670 NBPF8-201ENST00000583271 5330 ntBASIC7.51□□□□□ -1.21
RFX1P22670 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RFX1P22670 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RFX1P22670 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.51□□□□□ -1.21
RFX1P22670 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.5□□□□□ -1.21
RFX1P22670 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
RFX1P22670 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.5□□□□□ -1.21
RFX1P22670 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.5□□□□□ -1.21
RFX1P22670 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
RFX1P22670 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
RFX1P22670 MAPK10-344ENST00000641718 3746 ntBASIC7.5□□□□□ -1.21
RFX1P22670 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.5□□□□□ -1.21
RFX1P22670 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.5□□□□□ -1.21
RFX1P22670 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC7.5□□□□□ -1.21
RFX1P22670 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RFX1P22670 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RFX1P22670 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RFX1P22670 RNU5F-6P-201ENST00000362979 116 ntBASIC7.5□□□□□ -1.21
RFX1P22670 RN7SKP55-201ENST00000364888 307 ntBASIC7.5□□□□□ -1.21
RFX1P22670 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
RFX1P22670 AL391419.1-201ENST00000398901 1275 ntBASIC7.5□□□□□ -1.21
RFX1P22670 MTND4LP20-201ENST00000402379 270 ntBASIC7.5□□□□□ -1.21
RFX1P22670 MTCO3P1-205ENST00000422088 832 ntBASIC7.5□□□□□ -1.21
RFX1P22670 AC073335.1-201ENST00000427776 363 ntBASIC7.5□□□□□ -1.21
RFX1P22670 RPL7P31-201ENST00000450192 724 ntBASIC7.5□□□□□ -1.21
RFX1P22670 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC7.5□□□□□ -1.21
RFX1P22670 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC7.5□□□□□ -1.21
RFX1P22670 RN7SL393P-201ENST00000463588 296 ntBASIC7.5□□□□□ -1.21
RFX1P22670 AC098818.1-201ENST00000478593 252 ntBASIC7.5□□□□□ -1.21
RFX1P22670 RPL29P23-201ENST00000486188 442 ntBASIC7.5□□□□□ -1.21
RFX1P22670 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC7.5□□□□□ -1.21
RFX1P22670 AC105252.1-201ENST00000503089 286 ntBASIC7.5□□□□□ -1.21
RFX1P22670 RN7SKP98-201ENST00000517070 156 ntBASIC7.5□□□□□ -1.21
RFX1P22670 CARSP2-201ENST00000520688 277 ntBASIC7.5□□□□□ -1.21
RFX1P22670 AP001803.1-201ENST00000525668 147 ntBASIC7.5□□□□□ -1.21
RFX1P22670 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC7.5□□□□□ -1.21
RFX1P22670 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.5□□□□□ -1.21
RFX1P22670 AL135978.1-201ENST00000553618 1266 ntBASIC7.5□□□□□ -1.21
RFX1P22670 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC7.5□□□□□ -1.21
RFX1P22670 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RFX1P22670 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.5□□□□□ -1.21
RFX1P22670 AC012417.1-201ENST00000582307 1039 ntBASIC7.5□□□□□ -1.21
RFX1P22670 MIR4271-201ENST00000582451 67 ntBASIC7.5□□□□□ -1.21
RFX1P22670 AL159169.3-201ENST00000608871 561 ntBASIC7.5□□□□□ -1.21
RFX1P22670 AC091768.1-201ENST00000609258 930 ntBASIC7.5□□□□□ -1.21
RFX1P22670 AC012409.3-201ENST00000611343 981 ntBASIC7.5□□□□□ -1.21
RFX1P22670 AC120057.5-201ENST00000623840 154 ntBASIC7.5□□□□□ -1.21
RFX1P22670 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.5□□□□□ -1.21
RFX1P22670 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.5□□□□□ -1.21
RFX1P22670 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
RFX1P22670 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RFX1P22670 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RFX1P22670 AL031651.1-201ENST00000615357 1438 ntBASIC7.5□□□□□ -1.21
RFX1P22670 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RFX1P22670 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RFX1P22670 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.5□□□□□ -1.21
RFX1P22670 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RFX1P22670 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms