Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 RMST_3.1-201ENST00000611651 109 ntBASIC7.72□□□□□ -1.17
SMPD1P17405 AC037198.3-201ENST00000616754 526 ntBASIC7.72□□□□□ -1.17
SMPD1P17405 STMN1P1-201ENST00000617809 440 ntBASIC7.72□□□□□ -1.17
SMPD1P17405 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.72□□□□□ -1.17
SMPD1P17405 RPSAP68-201ENST00000625020 438 ntBASIC7.72□□□□□ -1.17
SMPD1P17405 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.72□□□□□ -1.17
SMPD1P17405 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SMPD1P17405 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.72□□□□□ -1.17
SMPD1P17405 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SMPD1P17405 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.72□□□□□ -1.17
SMPD1P17405 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.72□□□□□ -1.17
SMPD1P17405 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
SMPD1P17405 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.72□□□□□ -1.17
SMPD1P17405 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
SMPD1P17405 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SMPD1P17405 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.72□□□□□ -1.17
SMPD1P17405 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SMPD1P17405 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC7.72□□□□□ -1.17
SMPD1P17405 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.72□□□□□ -1.17
SMPD1P17405 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.72□□□□□ -1.17
SMPD1P17405 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.72□□□□□ -1.17
SMPD1P17405 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
SMPD1P17405 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SMPD1P17405 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.71□□□□□ -1.17
SMPD1P17405 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
SMPD1P17405 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.71□□□□□ -1.17
SMPD1P17405 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SMPD1P17405 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
SMPD1P17405 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.71□□□□□ -1.18
SMPD1P17405 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.71□□□□□ -1.18
SMPD1P17405 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.71□□□□□ -1.18
SMPD1P17405 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
SMPD1P17405 RNA5SP140-201ENST00000364524 92 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 SNORA51.12-201ENST00000384448 134 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 UBBP1-201ENST00000392399 473 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 AL589994.1-201ENST00000404962 340 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 TXNP7-201ENST00000406296 293 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 AL356967.1-201ENST00000406305 431 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 HMGB3P18-201ENST00000406327 590 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 AC245054.2-201ENST00000415639 319 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 AC093698.1-201ENST00000423843 571 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC7.71□□□□□ -1.18
SMPD1P17405 RPL5P34-201ENST00000426545 891 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC7.71□□□□□ -1.18
SMPD1P17405 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.71□□□□□ -1.18
SMPD1P17405 RPL7L1P11-201ENST00000446092 721 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 RPL7P12-201ENST00000446719 750 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.71□□□□□ -1.18
SMPD1P17405 AC104339.1-201ENST00000465478 348 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 GLRXP3-201ENST00000470810 321 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 AC074386.1-201ENST00000476560 767 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 THAP6-203ENST00000502620 582 ntTSL 3 BASIC7.71□□□□□ -1.18
SMPD1P17405 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC7.71□□□□□ -1.18
SMPD1P17405 SNX18P23-201ENST00000510867 677 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 AC034159.1-201ENST00000513885 583 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 RNU6-1271P-201ENST00000517049 105 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.71□□□□□ -1.18
SMPD1P17405 AC087808.1-201ENST00000520501 361 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 AP005902.1-201ENST00000521358 186 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC7.71□□□□□ -1.18
SMPD1P17405 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC7.71□□□□□ -1.18
SMPD1P17405 AC009729.1-201ENST00000548873 1133 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC7.71□□□□□ -1.18
SMPD1P17405 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC7.71□□□□□ -1.18
SMPD1P17405 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.71□□□□□ -1.18
SMPD1P17405 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.71□□□□□ -1.18
SMPD1P17405 MIR4271-201ENST00000582451 67 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC7.71□□□□□ -1.18
SMPD1P17405 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC7.71□□□□□ -1.18
SMPD1P17405 AC068831.8-201ENST00000620171 435 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 MIR6806-201ENST00000622141 64 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 AC139792.3-201ENST00000623525 224 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 AL683826.1-201ENST00000624104 627 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SMPD1P17405 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SMPD1P17405 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
SMPD1P17405 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SMPD1P17405 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SMPD1P17405 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.71□□□□□ -1.18
SMPD1P17405 ZNF806-201ENST00000438300 1774 ntBASIC7.71□□□□□ -1.18
SMPD1P17405 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
SMPD1P17405 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
SMPD1P17405 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SMPD1P17405 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SMPD1P17405 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SMPD1P17405 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SMPD1P17405 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SMPD1P17405 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SMPD1P17405 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.7□□□□□ -1.18
SMPD1P17405 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SMPD1P17405 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.7□□□□□ -1.18
SMPD1P17405 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SMPD1P17405 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SMPD1P17405 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
SMPD1P17405 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SMPD1P17405 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.7□□□□□ -1.18
SMPD1P17405 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SMPD1P17405 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms