Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.46□□□□□ -1.54
COL11A1P12107 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.46□□□□□ -1.54
COL11A1P12107 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.46□□□□□ -1.54
COL11A1P12107 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL11A1P12107 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL11A1P12107 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.46□□□□□ -1.54
COL11A1P12107 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.46□□□□□ -1.54
COL11A1P12107 RN7SL817P-201ENST00000480777 288 ntBASIC5.46□□□□□ -1.54
COL11A1P12107 AC091868.1-201ENST00000508746 304 ntBASIC5.46□□□□□ -1.54
COL11A1P12107 BUD31P1-201ENST00000521828 359 ntBASIC5.46□□□□□ -1.54
COL11A1P12107 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.46□□□□□ -1.54
COL11A1P12107 MIR4284-201ENST00000578924 81 ntBASIC5.46□□□□□ -1.54
COL11A1P12107 AC020915.5-201ENST00000596836 964 ntBASIC5.46□□□□□ -1.54
COL11A1P12107 AC103792.1-201ENST00000603591 919 ntBASIC5.46□□□□□ -1.54
COL11A1P12107 AC010480.1-201ENST00000624823 684 ntBASIC5.46□□□□□ -1.54
COL11A1P12107 U3.53-201ENST00000628922 216 ntBASIC5.46□□□□□ -1.54
COL11A1P12107 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL11A1P12107 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.46□□□□□ -1.54
COL11A1P12107 ADAM5-202ENST00000399789 1942 ntBASIC5.46□□□□□ -1.54
COL11A1P12107 MTCO1P15-201ENST00000529569 1526 ntBASIC5.46□□□□□ -1.54
COL11A1P12107 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
COL11A1P12107 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC5.45□□□□□ -1.54
COL11A1P12107 AC125257.1-201ENST00000560400 2930 ntBASIC5.45□□□□□ -1.54
COL11A1P12107 OR56B2P-202ENST00000641377 2453 ntBASIC5.45□□□□□ -1.54
COL11A1P12107 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
COL11A1P12107 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
COL11A1P12107 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.45□□□□□ -1.54
COL11A1P12107 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL11A1P12107 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
COL11A1P12107 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
COL11A1P12107 AL354766.1-201ENST00000423396 542 ntBASIC5.45□□□□□ -1.54
COL11A1P12107 AC109327.1-201ENST00000471666 403 ntBASIC5.45□□□□□ -1.54
COL11A1P12107 RN7SKP21-201ENST00000516503 220 ntBASIC5.45□□□□□ -1.54
COL11A1P12107 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.45□□□□□ -1.54
COL11A1P12107 AC009643.1-201ENST00000532030 391 ntBASIC5.45□□□□□ -1.54
COL11A1P12107 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.45□□□□□ -1.54
COL11A1P12107 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL11A1P12107 AL031658.2-201ENST00000616850 651 ntBASIC5.45□□□□□ -1.54
COL11A1P12107 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL11A1P12107 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.45□□□□□ -1.54
COL11A1P12107 TRIM51GP-201ENST00000534741 1350 ntBASIC5.45□□□□□ -1.54
COL11A1P12107 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL11A1P12107 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
COL11A1P12107 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.45□□□□□ -1.54
COL11A1P12107 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL11A1P12107 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
COL11A1P12107 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL11A1P12107 CCT8P1-201ENST00000413611 1657 ntBASIC5.45□□□□□ -1.54
COL11A1P12107 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL11A1P12107 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL11A1P12107 Y_RNA.126-201ENST00000363382 111 ntBASIC5.44□□□□□ -1.54
COL11A1P12107 RNA5SP447-201ENST00000363749 119 ntBASIC5.44□□□□□ -1.54
COL11A1P12107 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.44□□□□□ -1.54
COL11A1P12107 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.44□□□□□ -1.54
COL11A1P12107 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.44□□□□□ -1.54
COL11A1P12107 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.44□□□□□ -1.54
COL11A1P12107 AC100784.1-201ENST00000522790 310 ntBASIC5.44□□□□□ -1.54
COL11A1P12107 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
COL11A1P12107 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.44□□□□□ -1.54
COL11A1P12107 AGGF1P9-201ENST00000561884 913 ntBASIC5.44□□□□□ -1.54
COL11A1P12107 AC090181.2-201ENST00000602975 672 ntBASIC5.44□□□□□ -1.54
COL11A1P12107 AC005191.1-201ENST00000603950 358 ntBASIC5.44□□□□□ -1.54
COL11A1P12107 AC006338.2-201ENST00000616864 791 ntBASIC5.44□□□□□ -1.54
COL11A1P12107 AC011815.3-201ENST00000624194 473 ntBASIC5.44□□□□□ -1.54
COL11A1P12107 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.44□□□□□ -1.54
COL11A1P12107 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL11A1P12107 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL11A1P12107 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL11A1P12107 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL11A1P12107 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.44□□□□□ -1.54
COL11A1P12107 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL11A1P12107 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL11A1P12107 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.44□□□□□ -1.54
COL11A1P12107 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
COL11A1P12107 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.44□□□□□ -1.54
COL11A1P12107 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL11A1P12107 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL11A1P12107 RNA5SP479-201ENST00000364858 117 ntBASIC5.44□□□□□ -1.54
COL11A1P12107 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL11A1P12107 LINC00993-201ENST00000420453 540 ntBASIC5.44□□□□□ -1.54
COL11A1P12107 AC108463.1-201ENST00000450258 347 ntBASIC5.44□□□□□ -1.54
COL11A1P12107 Z95152.1-201ENST00000453556 656 ntBASIC5.44□□□□□ -1.54
COL11A1P12107 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.44□□□□□ -1.54
COL11A1P12107 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
COL11A1P12107 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL11A1P12107 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.44□□□□□ -1.54
COL11A1P12107 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.44□□□□□ -1.54
COL11A1P12107 MIR3160-1-201ENST00000577972 85 ntBASIC5.44□□□□□ -1.54
COL11A1P12107 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.44□□□□□ -1.54
COL11A1P12107 AL392048.1-201ENST00000613946 534 ntBASIC5.44□□□□□ -1.54
COL11A1P12107 AC002044.3-201ENST00000623314 541 ntBASIC5.44□□□□□ -1.54
COL11A1P12107 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL11A1P12107 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL11A1P12107 AL591135.1-201ENST00000401578 5914 ntBASIC5.43□□□□□ -1.54
COL11A1P12107 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL11A1P12107 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
COL11A1P12107 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL11A1P12107 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.43□□□□□ -1.54
COL11A1P12107 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL11A1P12107 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms