Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC107308.1-201ENST00000615897 301 ntBASIC5.34□□□□□ -1.55
KRT3P12035 BNIP3P41-202ENST00000616656 861 ntBASIC5.34□□□□□ -1.55
KRT3P12035 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.34□□□□□ -1.55
KRT3P12035 AC006840.1-201ENST00000623069 542 ntBASIC5.34□□□□□ -1.55
KRT3P12035 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.34□□□□□ -1.55
KRT3P12035 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.34□□□□□ -1.55
KRT3P12035 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.34□□□□□ -1.56
KRT3P12035 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRT3P12035 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.33□□□□□ -1.56
KRT3P12035 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRT3P12035 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.33□□□□□ -1.56
KRT3P12035 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.33□□□□□ -1.56
KRT3P12035 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRT3P12035 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
KRT3P12035 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.33□□□□□ -1.56
KRT3P12035 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRT3P12035 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRT3P12035 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRT3P12035 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.33□□□□□ -1.56
KRT3P12035 RNA5SP296-201ENST00000410523 111 ntBASIC5.33□□□□□ -1.56
KRT3P12035 SETP15-201ENST00000412724 337 ntBASIC5.33□□□□□ -1.56
KRT3P12035 AC007738.1-201ENST00000413892 348 ntBASIC5.33□□□□□ -1.56
KRT3P12035 RAB9AP4-201ENST00000415230 609 ntBASIC5.33□□□□□ -1.56
KRT3P12035 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.33□□□□□ -1.56
KRT3P12035 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRT3P12035 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.33□□□□□ -1.56
KRT3P12035 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.33□□□□□ -1.56
KRT3P12035 BX323845.1-201ENST00000432417 179 ntBASIC5.33□□□□□ -1.56
KRT3P12035 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.33□□□□□ -1.56
KRT3P12035 AC092647.2-201ENST00000452998 253 ntBASIC5.33□□□□□ -1.56
KRT3P12035 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
KRT3P12035 OR11I1P-201ENST00000486033 954 ntBASIC5.33□□□□□ -1.56
KRT3P12035 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.33□□□□□ -1.56
KRT3P12035 HIGD1AP14-201ENST00000507617 282 ntBASIC5.33□□□□□ -1.56
KRT3P12035 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.33□□□□□ -1.56
KRT3P12035 RN7SKP34-201ENST00000516142 244 ntBASIC5.33□□□□□ -1.56
KRT3P12035 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.33□□□□□ -1.56
KRT3P12035 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRT3P12035 OR11J2P-201ENST00000555298 907 ntBASIC5.33□□□□□ -1.56
KRT3P12035 AC018552.1-201ENST00000562099 811 ntBASIC5.33□□□□□ -1.56
KRT3P12035 BX005214.3-202ENST00000619809 325 ntBASIC5.33□□□□□ -1.56
KRT3P12035 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRT3P12035 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRT3P12035 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRT3P12035 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRT3P12035 SOCS5P3-201ENST00000425115 1576 ntBASIC5.33□□□□□ -1.56
KRT3P12035 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRT3P12035 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRT3P12035 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
KRT3P12035 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRT3P12035 AC104260.2-201ENST00000623551 3497 ntBASIC5.32□□□□□ -1.56
KRT3P12035 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.32□□□□□ -1.56
KRT3P12035 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
KRT3P12035 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRT3P12035 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRT3P12035 AC017079.1-201ENST00000333650 415 ntBASIC5.32□□□□□ -1.56
KRT3P12035 RNU6-171P-201ENST00000384354 107 ntBASIC5.32□□□□□ -1.56
KRT3P12035 RNU6-1320P-201ENST00000390838 107 ntBASIC5.32□□□□□ -1.56
KRT3P12035 RNU6-1269P-201ENST00000391139 107 ntBASIC5.32□□□□□ -1.56
KRT3P12035 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRT3P12035 AC013429.2-201ENST00000418798 781 ntBASIC5.32□□□□□ -1.56
KRT3P12035 AC106901.1-201ENST00000425086 698 ntBASIC5.32□□□□□ -1.56
KRT3P12035 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.32□□□□□ -1.56
KRT3P12035 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.32□□□□□ -1.56
KRT3P12035 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.32□□□□□ -1.56
KRT3P12035 CNOT7P2-201ENST00000441051 832 ntBASIC5.32□□□□□ -1.56
KRT3P12035 KNOP1P3-201ENST00000446933 426 ntBASIC5.32□□□□□ -1.56
KRT3P12035 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.32□□□□□ -1.56
KRT3P12035 RNU6-599P-201ENST00000459383 107 ntBASIC5.32□□□□□ -1.56
KRT3P12035 RNU6-1193P-201ENST00000459461 107 ntBASIC5.32□□□□□ -1.56
KRT3P12035 AC097484.1-201ENST00000471148 389 ntBASIC5.32□□□□□ -1.56
KRT3P12035 RN7SL222P-201ENST00000476452 299 ntBASIC5.32□□□□□ -1.56
KRT3P12035 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRT3P12035 NPM1P52-201ENST00000518264 846 ntBASIC5.32□□□□□ -1.56
KRT3P12035 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.32□□□□□ -1.56
KRT3P12035 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.32□□□□□ -1.56
KRT3P12035 AL512310.9-201ENST00000553311 948 ntBASIC5.32□□□□□ -1.56
KRT3P12035 AC009268.1-201ENST00000561352 1203 ntBASIC5.32□□□□□ -1.56
KRT3P12035 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.32□□□□□ -1.56
KRT3P12035 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.32□□□□□ -1.56
KRT3P12035 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.32□□□□□ -1.56
KRT3P12035 SUMO2P15-201ENST00000604285 278 ntBASIC5.32□□□□□ -1.56
KRT3P12035 BNIP3P7-201ENST00000605641 516 ntBASIC5.32□□□□□ -1.56
KRT3P12035 AL133406.3-201ENST00000606817 541 ntBASIC5.32□□□□□ -1.56
KRT3P12035 RNU6-368P-201ENST00000620928 107 ntBASIC5.32□□□□□ -1.56
KRT3P12035 RNU6-538P-201ENST00000622329 107 ntBASIC5.32□□□□□ -1.56
KRT3P12035 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.32□□□□□ -1.56
KRT3P12035 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
KRT3P12035 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRT3P12035 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRT3P12035 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRT3P12035 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.32□□□□□ -1.56
KRT3P12035 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRT3P12035 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
KRT3P12035 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
KRT3P12035 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRT3P12035 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRT3P12035 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRT3P12035 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
KRT3P12035 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms