Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 FMO7P-201ENST00000436045 768 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 AC004938.1-201ENST00000438468 308 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 AC104634.1-201ENST00000452720 462 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 AC118758.1-202ENST00000454719 225 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 AC007998.1-201ENST00000474156 672 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 AC044810.1-201ENST00000480271 711 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 AC093270.2-201ENST00000486157 792 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 CBX1-205ENST00000495350 550 ntTSL 2 BASIC3.78□□□□□ -1.8
CXCL1P09341 RN7SL558P-201ENST00000497468 299 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 RN7SL612P-201ENST00000497704 295 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 PPBPP1-201ENST00000510807 373 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 AC012400.1-201ENST00000518452 381 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCL1P09341 AC107958.1-201ENST00000556576 290 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 AC015720.2-201ENST00000567709 334 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.78□□□□□ -1.8
CXCL1P09341 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCL1P09341 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC3.78□□□□□ -1.8
CXCL1P09341 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.78□□□□□ -1.8
CXCL1P09341 AC008115.3-201ENST00000614874 549 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.78□□□□□ -1.8
CXCL1P09341 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCL1P09341 AC135068.12-201ENST00000637370 931 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CXCL1P09341 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL1P09341 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL1P09341 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL1P09341 AC112255.1-201ENST00000624070 2493 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL1P09341 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CXCL1P09341 MTND5P23-201ENST00000430812 1655 ntBASIC3.78□□□□□ -1.81
CXCL1P09341 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
CXCL1P09341 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.77□□□□□ -1.81
CXCL1P09341 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CXCL1P09341 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CXCL1P09341 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CXCL1P09341 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CXCL1P09341 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CXCL1P09341 EEF1A1P21-201ENST00000512363 1344 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CXCL1P09341 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CXCL1P09341 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CXCL1P09341 RN7SKP113-201ENST00000363891 295 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 SNORD74.4-201ENST00000364129 80 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 RNA5SP90-201ENST00000364801 99 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CXCL1P09341 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.77□□□□□ -1.81
CXCL1P09341 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CXCL1P09341 AL133388.1-201ENST00000404509 287 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.77□□□□□ -1.81
CXCL1P09341 SKP1P3-201ENST00000429280 487 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.77□□□□□ -1.81
CXCL1P09341 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC3.77□□□□□ -1.81
CXCL1P09341 PRPF38AP2-201ENST00000438179 851 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 RPS29P10-201ENST00000439197 166 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 TXNP5-201ENST00000441043 315 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC3.77□□□□□ -1.81
CXCL1P09341 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC3.77□□□□□ -1.81
CXCL1P09341 AL591363.1-201ENST00000450091 483 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 AL451050.1-201ENST00000450126 415 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 RPS17P2-201ENST00000461663 408 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC3.77□□□□□ -1.81
CXCL1P09341 AC109481.1-201ENST00000509173 282 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC3.77□□□□□ -1.81
CXCL1P09341 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC3.77□□□□□ -1.81
CXCL1P09341 TRIM77BP-201ENST00000524985 1119 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 BLZF2P-201ENST00000553776 1130 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC3.77□□□□□ -1.81
CXCL1P09341 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC3.77□□□□□ -1.81
CXCL1P09341 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.77□□□□□ -1.81
CXCL1P09341 AC068790.5-201ENST00000602741 355 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 AL359091.2-201ENST00000609303 556 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 AC026368.1-201ENST00000614934 690 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CXCL1P09341 HTR1DP1-201ENST00000616500 888 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC3.77□□□□□ -1.81
CXCL1P09341 AL356121.2-201ENST00000624715 780 ntBASIC3.77□□□□□ -1.81
CXCL1P09341 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
CXCL1P09341 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CXCL1P09341 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.77□□□□□ -1.81
CXCL1P09341 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC3.77□□□□□ -1.81
CXCL1P09341 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CXCL1P09341 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.77□□□□□ -1.81
CXCL1P09341 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CXCL1P09341 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CXCL1P09341 AC090181.3-201ENST00000624777 1514 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 AC012020.1-201ENST00000624541 1728 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.76□□□□□ -1.81
CXCL1P09341 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CXCL1P09341 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CXCL1P09341 U3.3-201ENST00000362986 216 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 RN7SKP275-201ENST00000364626 301 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 SNORA2.3-201ENST00000383920 135 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 RNA5SP122-201ENST00000384457 108 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CXCL1P09341 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC3.76□□□□□ -1.81
CXCL1P09341 TNPO1P1-201ENST00000423641 1138 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 NANOGP6-201ENST00000429190 847 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms