Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.71□□□□□ -1.49
MMP3P08254 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
MMP3P08254 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.71□□□□□ -1.5
MMP3P08254 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.71□□□□□ -1.5
MMP3P08254 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
MMP3P08254 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.71□□□□□ -1.5
MMP3P08254 MIR421-201ENST00000365696 85 ntBASIC5.71□□□□□ -1.5
MMP3P08254 MIR141-201ENST00000384975 95 ntBASIC5.71□□□□□ -1.5
MMP3P08254 AMZ2P2-201ENST00000406819 1057 ntBASIC5.71□□□□□ -1.5
MMP3P08254 PTGES3P2-201ENST00000407942 482 ntBASIC5.71□□□□□ -1.5
MMP3P08254 RN7SKP17-201ENST00000411242 351 ntBASIC5.71□□□□□ -1.5
MMP3P08254 AC016397.1-201ENST00000412463 242 ntBASIC5.71□□□□□ -1.5
MMP3P08254 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.71□□□□□ -1.5
MMP3P08254 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.71□□□□□ -1.5
MMP3P08254 AC023141.6-201ENST00000429418 337 ntBASIC5.71□□□□□ -1.5
MMP3P08254 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
MMP3P08254 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
MMP3P08254 TXNP2-201ENST00000443918 295 ntBASIC5.71□□□□□ -1.5
MMP3P08254 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.71□□□□□ -1.5
MMP3P08254 AC092905.1-201ENST00000467527 949 ntBASIC5.71□□□□□ -1.5
MMP3P08254 AC016687.1-201ENST00000482574 353 ntBASIC5.71□□□□□ -1.5
MMP3P08254 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.71□□□□□ -1.5
MMP3P08254 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.71□□□□□ -1.5
MMP3P08254 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.71□□□□□ -1.5
MMP3P08254 SEC11B-201ENST00000518383 499 ntBASIC5.71□□□□□ -1.5
MMP3P08254 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.71□□□□□ -1.5
MMP3P08254 GCSHP4-201ENST00000538792 439 ntBASIC5.71□□□□□ -1.5
MMP3P08254 BNIP3P1-201ENST00000547295 580 ntBASIC5.71□□□□□ -1.5
MMP3P08254 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.71□□□□□ -1.5
MMP3P08254 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.71□□□□□ -1.5
MMP3P08254 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.71□□□□□ -1.5
MMP3P08254 AC107993.1-201ENST00000591343 684 ntBASIC5.71□□□□□ -1.5
MMP3P08254 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
MMP3P08254 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
MMP3P08254 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
MMP3P08254 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.71□□□□□ -1.5
MMP3P08254 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
MMP3P08254 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
MMP3P08254 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.71□□□□□ -1.5
MMP3P08254 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.71□□□□□ -1.5
MMP3P08254 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.71□□□□□ -1.5
MMP3P08254 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
MMP3P08254 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
MMP3P08254 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.7□□□□□ -1.5
MMP3P08254 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
MMP3P08254 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
MMP3P08254 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
MMP3P08254 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
MMP3P08254 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.7□□□□□ -1.5
MMP3P08254 RN7SKP186-201ENST00000365371 303 ntBASIC5.7□□□□□ -1.5
MMP3P08254 RNU6-40P-201ENST00000384254 107 ntBASIC5.7□□□□□ -1.5
MMP3P08254 AC073464.3-201ENST00000422564 712 ntBASIC5.7□□□□□ -1.5
MMP3P08254 ELOCP6-201ENST00000429066 328 ntBASIC5.7□□□□□ -1.5
MMP3P08254 BX323845.1-201ENST00000432417 179 ntBASIC5.7□□□□□ -1.5
MMP3P08254 RNF2P1-201ENST00000442955 1010 ntBASIC5.7□□□□□ -1.5
MMP3P08254 AL137845.2-201ENST00000444292 988 ntBASIC5.7□□□□□ -1.5
MMP3P08254 AL354714.3-201ENST00000447284 493 ntBASIC5.7□□□□□ -1.5
MMP3P08254 TPT1P13-201ENST00000449760 499 ntBASIC5.7□□□□□ -1.5
MMP3P08254 ELOCP12-201ENST00000458706 328 ntBASIC5.7□□□□□ -1.5
MMP3P08254 CR383656.1-201ENST00000484916 377 ntBASIC5.7□□□□□ -1.5
MMP3P08254 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.7□□□□□ -1.5
MMP3P08254 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.7□□□□□ -1.5
MMP3P08254 AC010350.1-201ENST00000504908 231 ntBASIC5.7□□□□□ -1.5
MMP3P08254 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.7□□□□□ -1.5
MMP3P08254 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.7□□□□□ -1.5
MMP3P08254 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
MMP3P08254 NMNAT1P1-201ENST00000554095 876 ntBASIC5.7□□□□□ -1.5
MMP3P08254 BGLT3-201ENST00000564523 994 ntBASIC5.7□□□□□ -1.5
MMP3P08254 BNIP3P27-201ENST00000599991 412 ntBASIC5.7□□□□□ -1.5
MMP3P08254 AP003117.1-201ENST00000602771 554 ntBASIC5.7□□□□□ -1.5
MMP3P08254 AL450270.1-201ENST00000606160 391 ntBASIC5.7□□□□□ -1.5
MMP3P08254 AL391834.1-201ENST00000609609 560 ntBASIC5.7□□□□□ -1.5
MMP3P08254 AC110792.4-201ENST00000609843 298 ntBASIC5.7□□□□□ -1.5
MMP3P08254 AC010435.1-201ENST00000623353 1177 ntBASIC5.7□□□□□ -1.5
MMP3P08254 AC097372.4-201ENST00000625025 466 ntBASIC5.7□□□□□ -1.5
MMP3P08254 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.7□□□□□ -1.5
MMP3P08254 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.7□□□□□ -1.5
MMP3P08254 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
MMP3P08254 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
MMP3P08254 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
MMP3P08254 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
MMP3P08254 AC087565.3-202ENST00000642085 1603 ntBASIC5.7□□□□□ -1.5
MMP3P08254 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
MMP3P08254 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
MMP3P08254 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.7□□□□□ -1.5
MMP3P08254 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.69□□□□□ -1.5
MMP3P08254 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
MMP3P08254 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
MMP3P08254 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MMP3P08254 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
MMP3P08254 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
MMP3P08254 AC006210.2-201ENST00000367074 1545 ntBASIC5.69□□□□□ -1.5
MMP3P08254 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.69□□□□□ -1.5
MMP3P08254 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
MMP3P08254 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.69□□□□□ -1.5
MMP3P08254 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.69□□□□□ -1.5
MMP3P08254 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
MMP3P08254 CUL4AP1-201ENST00000514750 1863 ntBASIC5.69□□□□□ -1.5
MMP3P08254 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MMP3P08254 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms