Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL512637.1-201ENST00000439523 1231 ntBASIC3.79□□□□□ -1.8
HLA-DQA1P01909 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AL591363.1-201ENST00000450091 483 ntBASIC3.79□□□□□ -1.8
HLA-DQA1P01909 MTND6P32-201ENST00000457611 483 ntBASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AC011476.1-201ENST00000466725 307 ntBASIC3.79□□□□□ -1.8
HLA-DQA1P01909 RN7SL441P-201ENST00000492388 296 ntBASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AC097173.1-201ENST00000505862 819 ntBASIC3.79□□□□□ -1.8
HLA-DQA1P01909 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 IGHVII-60-1-201ENST00000519079 256 ntBASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AC112191.2-201ENST00000522428 333 ntBASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 HMGB1P42-201ENST00000532126 553 ntBASIC3.79□□□□□ -1.8
HLA-DQA1P01909 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AC125612.1-201ENST00000547580 377 ntBASIC3.79□□□□□ -1.8
HLA-DQA1P01909 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AC079075.1-201ENST00000559543 878 ntBASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AC008814.1-201ENST00000603797 406 ntBASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AC091979.2-201ENST00000607514 214 ntBASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AC091305.2-201ENST00000624049 1576 ntBASIC3.79□□□□□ -1.8
HLA-DQA1P01909 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQA1P01909 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 RNU6-697P-201ENST00000363348 107 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 RNU1-83P-201ENST00000363426 164 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 OR8V1P-201ENST00000395193 873 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 HMGB1P20-201ENST00000402555 677 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 SNORA11.5-201ENST00000408163 128 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 EEF1B2P8-201ENST00000414101 671 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 PTP4A1P1-201ENST00000420539 515 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 AC058823.1-201ENST00000485315 474 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 RPS4XP18-201ENST00000495480 763 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 HMGB1P44-201ENST00000508597 572 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 RN7SKP99-201ENST00000517028 307 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 AL512310.9-201ENST00000553311 948 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 AC008521.2-201ENST00000591021 259 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 AC100767.2-201ENST00000604840 693 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 AC117490.2-201ENST00000610042 594 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 AC005086.4-201ENST00000623065 213 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 AC015660.5-201ENST00000623238 564 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 OR8A1-204ENST00000642111 1145 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
HLA-DQA1P01909 AC112255.1-201ENST00000624070 2493 ntBASIC3.78□□□□□ -1.8
HLA-DQA1P01909 ALB-214ENST00000509063 1911 ntTSL 5 BASIC3.78□□□□□ -1.81
HLA-DQA1P01909 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
HLA-DQA1P01909 IRF5P1-201ENST00000504852 2164 ntBASIC3.78□□□□□ -1.81
HLA-DQA1P01909 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 YES1P1-201ENST00000418510 1628 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms