Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.13□□□□□ -1.75
SDCBPO00560 RPS29P9-201ENST00000440360 171 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.13□□□□□ -1.75
SDCBPO00560 AC092647.2-201ENST00000452998 253 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.13□□□□□ -1.75
SDCBPO00560 AC097484.1-201ENST00000471148 389 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 COPS8P2-201ENST00000473228 627 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 NPM1P29-201ENST00000483112 803 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 OR11I1P-201ENST00000486033 954 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 AC072052.1-201ENST00000496556 306 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 HIGD1AP14-201ENST00000507617 282 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.13□□□□□ -1.75
SDCBPO00560 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.13□□□□□ -1.75
SDCBPO00560 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.13□□□□□ -1.75
SDCBPO00560 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.13□□□□□ -1.75
SDCBPO00560 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.13□□□□□ -1.75
SDCBPO00560 RNA5SP464-201ENST00000516251 108 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.13□□□□□ -1.75
SDCBPO00560 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.13□□□□□ -1.75
SDCBPO00560 NMNAT1P1-201ENST00000554095 876 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.13□□□□□ -1.75
SDCBPO00560 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.13□□□□□ -1.75
SDCBPO00560 EIF1P5-201ENST00000585002 234 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.13□□□□□ -1.75
SDCBPO00560 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.13□□□□□ -1.75
SDCBPO00560 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.13□□□□□ -1.75
SDCBPO00560 AL049794.2-201ENST00000616301 365 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 AC015804.1-201ENST00000622935 435 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.13□□□□□ -1.75
SDCBPO00560 PABPC1P6-201ENST00000445594 1829 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 AL034370.1-201ENST00000397254 1590 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SDCBPO00560 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SDCBPO00560 AC083843.3-201ENST00000623679 2186 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.13□□□□□ -1.75
SDCBPO00560 AC097461.1-201ENST00000568928 2821 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.12□□□□□ -1.75
SDCBPO00560 NXF4-202ENST00000416098 1465 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SDCBPO00560 AC092435.4-201ENST00000623012 4159 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SDCBPO00560 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 AC007342.5-201ENST00000571340 2142 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 AC099654.3-201ENST00000447087 1546 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.12□□□□□ -1.75
SDCBPO00560 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SDCBPO00560 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SDCBPO00560 ATP5HP3-201ENST00000396994 486 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.12□□□□□ -1.75
SDCBPO00560 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.12□□□□□ -1.75
SDCBPO00560 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.12□□□□□ -1.75
SDCBPO00560 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.12□□□□□ -1.75
SDCBPO00560 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.12□□□□□ -1.75
SDCBPO00560 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.12□□□□□ -1.75
SDCBPO00560 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.12□□□□□ -1.75
SDCBPO00560 RPS26P2-201ENST00000440331 348 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.12□□□□□ -1.75
SDCBPO00560 KNOP1P3-201ENST00000446933 426 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SDCBPO00560 TCEA1P1-201ENST00000449716 880 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 IGHV5-78-201ENST00000450948 295 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 OTX2P1-201ENST00000450956 354 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.12□□□□□ -1.75
SDCBPO00560 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.12□□□□□ -1.75
SDCBPO00560 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.12□□□□□ -1.75
SDCBPO00560 AC079841.1-201ENST00000481228 950 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 HMGN2P25-201ENST00000486956 268 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.12□□□□□ -1.75
SDCBPO00560 RN7SL244P-201ENST00000493405 297 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.12□□□□□ -1.75
SDCBPO00560 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.12□□□□□ -1.75
SDCBPO00560 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SDCBPO00560 AC026688.1-201ENST00000520639 1168 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.12□□□□□ -1.75
SDCBPO00560 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.12□□□□□ -1.75
SDCBPO00560 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.12□□□□□ -1.75
SDCBPO00560 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.12□□□□□ -1.75
SDCBPO00560 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
SDCBPO00560 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.12□□□□□ -1.75
SDCBPO00560 AC105254.2-201ENST00000603636 436 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.12□□□□□ -1.75
SDCBPO00560 AC097505.1-201ENST00000610199 565 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 AC012414.7-202ENST00000622705 1090 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SDCBPO00560 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SDCBPO00560 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.12□□□□□ -1.75
SDCBPO00560 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SDCBPO00560 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SDCBPO00560 AL359922.3-201ENST00000624779 1670 ntBASIC4.12□□□□□ -1.75
SDCBPO00560 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SDCBPO00560 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SDCBPO00560 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SDCBPO00560 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SDCBPO00560 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
SDCBPO00560 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SDCBPO00560 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms