Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 COX6B1P5-201ENST00000509843 249 ntBASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 OR51K1P-201ENST00000510214 950 ntBASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 HMGN1P9-201ENST00000515212 298 ntBASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 OR7E128P-201ENST00000532736 1024 ntBASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 NMNAT1P1-201ENST00000554095 876 ntBASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 MIR4330-201ENST00000579077 105 ntBASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 AP000769.2-201ENST00000602344 396 ntBASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC087283.1-201ENST00000604029 1074 ntBASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL022311.1-201ENST00000623726 19416 ntBASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC010300.1-201ENST00000600671 5134 ntBASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 MIR192-201ENST00000384915 110 ntBASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 RPL10P10-201ENST00000403509 664 ntBASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 CHEK2P3-201ENST00000416118 248 ntBASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL138878.2-201ENST00000440581 1241 ntBASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL136455.1-201ENST00000441083 1240 ntBASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 RNA5SP103-201ENST00000459503 118 ntBASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 SCARNA20.4-201ENST00000516969 131 ntBASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 IGKV1-32-201ENST00000519290 311 ntBASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 OR11H3P-201ENST00000554547 982 ntBASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 BGLT3-201ENST00000564523 994 ntBASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AP005262.1-201ENST00000582646 997 ntBASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL162431.4-201ENST00000604674 411 ntBASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC087783.2-201ENST00000605070 562 ntBASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC244107.2-201ENST00000611773 76 ntBASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC135068.5-201ENST00000624197 983 ntBASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 SMG1P7-201ENST00000565246 2704 ntBASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
TMX2-CTNND1H3BSU7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
TMX2-CTNND1H3BSU7 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
TMX2-CTNND1H3BSU7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
TMX2-CTNND1H3BSU7 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 GAPDHP15-201ENST00000398586 975 ntBASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 RN7SKP97-201ENST00000410966 333 ntBASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 RN7SL205P-201ENST00000490174 284 ntBASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 LDHBP3-201ENST00000514909 822 ntBASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 OR8G3P-201ENST00000533406 921 ntBASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 RN7SL52P-201ENST00000584271 284 ntBASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 RN7SL722P-201ENST00000617780 284 ntBASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 RN7SL565P-201ENST00000618246 284 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms