Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 AC017002.4-201ENST00000604721 1525 ntBASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 SAMMSON-213ENST00000641336 1521 ntBASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.86□□□□□ -1.63
NPIPA3F8WFD2 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 OR55B1P-203ENST00000641518 2602 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AL356057.1-202ENST00000402263 756 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 RNA5SP487-201ENST00000410186 122 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 SETP10-201ENST00000424368 814 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 BX276092.6-201ENST00000430476 250 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 SCAND3P1-201ENST00000439854 1060 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AC017099.1-201ENST00000448261 1028 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AL645937.3-201ENST00000453647 936 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AL389915.2-201ENST00000454576 441 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 BX276092.8-201ENST00000455722 250 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AC092754.1-201ENST00000472975 479 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AC021106.1-201ENST00000509020 1058 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 MTCYBP19-201ENST00000517463 1124 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AP006245.2-201ENST00000522004 300 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AC079064.1-201ENST00000528365 362 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 CKS1BP1-201ENST00000555221 240 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AC009852.2-201ENST00000567898 485 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AL023583.1-201ENST00000607518 1143 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AL122125.1-201ENST00000616999 600 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AL356274.1-201ENST00000617064 410 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AL356094.1-201ENST00000624663 1212 ntBASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NPIPA3F8WFD2 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 AC008079.2-201ENST00000623543 20396 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 HSPA8P14-201ENST00000552265 1805 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 MIR105-1-201ENST00000385222 81 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 PPIAP9-201ENST00000403866 498 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 RPL5P19-201ENST00000404228 893 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 RPL26P37-201ENST00000411983 438 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 NDUFB4P8-201ENST00000435351 367 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 RPL12P3-201ENST00000440080 396 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 GAPDHP25-201ENST00000447061 1001 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 OTX2P1-201ENST00000450956 354 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 SNRPCP2-201ENST00000504370 475 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 AC091912.1-201ENST00000511351 248 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 SETP12-201ENST00000514068 805 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 OR8K2P-201ENST00000524645 927 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 AL358913.1-201ENST00000554342 121 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 AC127381.1-201ENST00000555979 939 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 LINC00557-201ENST00000563184 1279 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 RN7SL708P-201ENST00000580952 299 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 MIR7853-201ENST00000584820 132 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 AC068020.1-201ENST00000594215 661 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms