Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC008147.3-201ENST00000548666 354 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC009268.1-201ENST00000561352 1203 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 RN7SL356P-201ENST00000582228 248 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC006116.3-201ENST00000592968 361 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC020915.5-201ENST00000596836 964 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 TAS2R6P-201ENST00000605022 826 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC096553.1-201ENST00000605169 829 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC131971.1-201ENST00000332881 1482 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AC100757.1-201ENST00000616872 1835 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AL589647.1-201ENST00000402485 466 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 U3.36-201ENST00000408418 213 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 RN7SKP125-201ENST00000410481 302 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AC211486.3-201ENST00000412694 621 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AC013470.3-201ENST00000420252 1194 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AC009784.1-201ENST00000426484 460 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 YY1P1-201ENST00000427625 668 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 MTND2P40-201ENST00000436718 841 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AC073850.1-201ENST00000449243 255 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AP000942.1-201ENST00000463969 747 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AC009127.1-201ENST00000467090 155 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 STRADBP1-201ENST00000478954 1281 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AC093827.1-201ENST00000480094 861 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 RPL7P6-201ENST00000480903 738 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 RN7SL97P-201ENST00000486780 299 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AC022133.1-201ENST00000490961 571 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 RPS23P1-201ENST00000491662 432 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 ATG10-AS1-201ENST00000504846 648 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 HMGN1P9-201ENST00000515212 298 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 SCARNA20.4-201ENST00000516969 131 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AC109635.6-201ENST00000525487 1113 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 OR8G3P-201ENST00000533406 921 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 YWHABP2-201ENST00000540201 713 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 NMNAT1P5-201ENST00000559657 841 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AL137072.1-201ENST00000603444 466 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AC095055.1-201ENST00000603472 1113 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AL133406.3-201ENST00000606817 541 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 RMST_5.1-201ENST00000618704 126 ntBASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA2E9PIF3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AC079298.1-201ENST00000625026 1619 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 RNA5SP305-201ENST00000362665 119 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 SNORA17.1-201ENST00000362945 126 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 RNU4-7P-201ENST00000364758 141 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AL607077.1-201ENST00000401718 499 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 RNU6-564P-201ENST00000410983 104 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms