Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPC1L1Q9UHC9 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NPC1L1Q9UHC9 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
NPC1L1Q9UHC9 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.61□□□□□ -1.35
NPC1L1Q9UHC9 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NPC1L1Q9UHC9 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.61□□□□□ -1.35
NPC1L1Q9UHC9 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.61□□□□□ -1.35
NPC1L1Q9UHC9 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.61□□□□□ -1.35
NPC1L1Q9UHC9 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.61□□□□□ -1.35
NPC1L1Q9UHC9 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.61□□□□□ -1.35
NPC1L1Q9UHC9 AL049839.1-201ENST00000556151 657 ntBASIC6.61□□□□□ -1.35
NPC1L1Q9UHC9 AP000919.1-201ENST00000582850 985 ntBASIC6.61□□□□□ -1.35
NPC1L1Q9UHC9 AC010503.3-201ENST00000594355 540 ntBASIC6.61□□□□□ -1.35
NPC1L1Q9UHC9 AF230666.2-201ENST00000602328 725 ntBASIC6.61□□□□□ -1.35
NPC1L1Q9UHC9 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPC1L1Q9UHC9 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 PRPF38AP2-201ENST00000438179 851 ntBASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 MIR5699-201ENST00000578903 90 ntBASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 Z95327.3-201ENST00000610385 572 ntBASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 AC243960.7-201ENST00000623532 707 ntBASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 MAPK10-328ENST00000641553 4009 ntBASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 AC003985.2-201ENST00000562268 1669 ntBASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 NCLP2-201ENST00000416078 1462 ntBASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
NPC1L1Q9UHC9 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 AC132825.1-201ENST00000463573 2247 ntBASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 AC017079.1-201ENST00000333650 415 ntBASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 ARL4AP5-201ENST00000404372 599 ntBASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 AC013429.2-201ENST00000418798 781 ntBASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 AC004074.1-201ENST00000421810 1063 ntBASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 AC092162.1-201ENST00000432828 434 ntBASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 AC073648.4-201ENST00000442655 781 ntBASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 RPL36AP15-201ENST00000444514 266 ntBASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 RPS5P7-201ENST00000456664 608 ntBASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 AC087283.1-201ENST00000604029 1074 ntBASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 AL121932.1-201ENST00000605542 214 ntBASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 SDAD1P1-202ENST00000524156 2051 ntBASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 MFSD8-216ENST00000641147 4009 ntBASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 AL450345.1-202ENST00000605741 3881 ntBASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NPC1L1Q9UHC9 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
NPC1L1Q9UHC9 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
NPC1L1Q9UHC9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
NPC1L1Q9UHC9 AC007382.1-201ENST00000624376 2618 ntBASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 RSU1P3-201ENST00000412878 835 ntBASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 AC010740.1-201ENST00000417035 684 ntBASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 BX510359.2-201ENST00000417920 305 ntBASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 EIF2S2P3-201ENST00000428356 999 ntBASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 GSTA7P-201ENST00000438425 448 ntBASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 TPT1P13-201ENST00000449760 499 ntBASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 RN7SL738P-201ENST00000470264 297 ntBASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 RN7SL346P-201ENST00000491561 294 ntBASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 UBE2FP2-201ENST00000566646 462 ntBASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 MIR3667-201ENST00000581025 74 ntBASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 AL512782.1-201ENST00000603093 364 ntBASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 AC010435.1-201ENST00000623353 1177 ntBASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 AC138965.3-201ENST00000623875 498 ntBASIC6.58□□□□□ -1.36
NPC1L1Q9UHC9 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms