Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC108751.2-201ENST00000469993 231 ntBASIC4.67□□□□□ -1.66
VAPAQ9P0L0 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 MIR3614-201ENST00000581261 86 ntBASIC4.67□□□□□ -1.66
VAPAQ9P0L0 AC087468.1-201ENST00000604365 630 ntBASIC4.67□□□□□ -1.66
VAPAQ9P0L0 IMMP1LP1-201ENST00000605170 488 ntBASIC4.67□□□□□ -1.66
VAPAQ9P0L0 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 AC016252.1-201ENST00000609721 474 ntBASIC4.67□□□□□ -1.66
VAPAQ9P0L0 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 AL049794.2-201ENST00000616301 365 ntBASIC4.67□□□□□ -1.66
VAPAQ9P0L0 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VAPAQ9P0L0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 SNORA17.1-201ENST00000362945 126 ntBASIC4.66□□□□□ -1.66
VAPAQ9P0L0 RNU1-43P-201ENST00000365052 165 ntBASIC4.66□□□□□ -1.66
VAPAQ9P0L0 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 AL672167.2-201ENST00000377164 879 ntBASIC4.66□□□□□ -1.66
VAPAQ9P0L0 AL512422.1-201ENST00000407033 553 ntBASIC4.66□□□□□ -1.66
VAPAQ9P0L0 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 RN7SKP125-201ENST00000410481 302 ntBASIC4.66□□□□□ -1.66
VAPAQ9P0L0 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.66□□□□□ -1.66
VAPAQ9P0L0 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.66□□□□□ -1.66
VAPAQ9P0L0 RPS29P14-201ENST00000431518 171 ntBASIC4.66□□□□□ -1.66
VAPAQ9P0L0 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 NMNAT1P2-201ENST00000435192 860 ntBASIC4.66□□□□□ -1.66
VAPAQ9P0L0 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 KNOP1P3-201ENST00000446933 426 ntBASIC4.66□□□□□ -1.66
VAPAQ9P0L0 OR52E7P-201ENST00000452394 933 ntBASIC4.66□□□□□ -1.66
VAPAQ9P0L0 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 SNORD95-201ENST00000579879 68 ntBASIC4.66□□□□□ -1.66
VAPAQ9P0L0 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 AC105254.2-201ENST00000603636 436 ntBASIC4.66□□□□□ -1.66
VAPAQ9P0L0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.66□□□□□ -1.66
VAPAQ9P0L0 AC067838.1-201ENST00000606064 577 ntBASIC4.66□□□□□ -1.66
VAPAQ9P0L0 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 AF117829.2-201ENST00000619538 361 ntBASIC4.66□□□□□ -1.66
VAPAQ9P0L0 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 AL672167.1-203ENST00000641299 2975 ntBASIC4.66□□□□□ -1.66
VAPAQ9P0L0 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 DHX9P1-201ENST00000436565 3076 ntBASIC4.66□□□□□ -1.66
VAPAQ9P0L0 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.66□□□□□ -1.66
VAPAQ9P0L0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VAPAQ9P0L0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VAPAQ9P0L0 LINC01355-201ENST00000566551 5444 ntBASIC4.65□□□□□ -1.66
VAPAQ9P0L0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.65□□□□□ -1.66
VAPAQ9P0L0 RNA5SP132-201ENST00000364725 118 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 SNORA66-201ENST00000384792 133 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 GAPDHP15-201ENST00000398586 975 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 U3.35-201ENST00000408405 208 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 AL591363.1-201ENST00000450091 483 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 AC092647.2-201ENST00000452998 253 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 AC023141.9-201ENST00000458734 412 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 RPSAP39-201ENST00000467439 883 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 TRBV8-1-201ENST00000481590 279 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 BTG4P1-201ENST00000510421 183 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms