Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RN7SKP36-201ENST00000363997 312 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 YWHAZP6-201ENST00000399764 738 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AL122016.1-201ENST00000403365 367 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 RNU6-908P-201ENST00000410160 94 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 RN7SKP32-201ENST00000410167 303 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 RNU2-39P-201ENST00000410604 198 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AL355862.1-201ENST00000412705 353 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 RPL35AP24-201ENST00000413846 330 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 RPL34P19-201ENST00000415903 342 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 RPL5P6-201ENST00000425640 886 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AC127526.2-201ENST00000426436 775 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 VDAC1P6-201ENST00000430062 855 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AL358934.1-201ENST00000432346 324 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 SEPT7P5-201ENST00000434048 306 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 SS18L2P1-201ENST00000445923 213 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 DHFRP3-201ENST00000455595 559 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AC022730.1-201ENST00000473114 568 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AC084878.1-201ENST00000480555 648 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 RN7SL516P-201ENST00000496127 297 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 RNU6-1046P-201ENST00000516538 107 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 OR6M2P-201ENST00000529831 871 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 OR4A45P-201ENST00000529954 901 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 CR382285.1-202ENST00000604687 547 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 TAS2R6P-201ENST00000605022 826 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 RNU6-88P-201ENST00000606801 100 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AL355472.4-201ENST00000610233 626 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AL137000.1-201ENST00000610528 1244 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 pRNA.9-201ENST00000618609 89 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 MIR8089-201ENST00000620165 82 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AC130448.2-201ENST00000624082 374 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 ASB8-218ENST00000629941 278 ntTSL 5 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AC243725.1-201ENST00000637164 436 ntBASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 HMGB1P5-201ENST00000255320 642 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 Y_RNA.157-201ENST00000363638 102 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 RNA5SP260-201ENST00000363849 111 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 SNORD15A-201ENST00000384214 148 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 RNU6-574P-201ENST00000384265 107 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 RNU4-70P-201ENST00000384579 139 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 RNU6-1105P-201ENST00000384774 107 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 MIR138-2-201ENST00000384916 84 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 JKAMPP1-201ENST00000413804 919 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 RPSAP1-201ENST00000421328 880 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 GAPDHP51-201ENST00000426454 1000 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms