Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CISHQ9NSE2 RN7SKP149-201ENST00000363008 344 ntBASIC5.16□□□□□ -1.58
CISHQ9NSE2 U3.30-201ENST00000391308 210 ntBASIC5.16□□□□□ -1.58
CISHQ9NSE2 RPL10P10-201ENST00000403509 664 ntBASIC5.16□□□□□ -1.58
CISHQ9NSE2 RN7SKP125-201ENST00000410481 302 ntBASIC5.16□□□□□ -1.58
CISHQ9NSE2 AC114755.2-201ENST00000413520 361 ntBASIC5.16□□□□□ -1.58
CISHQ9NSE2 RGS17P1-201ENST00000423358 553 ntBASIC5.16□□□□□ -1.58
CISHQ9NSE2 AL590762.4-201ENST00000425885 253 ntBASIC5.16□□□□□ -1.58
CISHQ9NSE2 AC007559.1-201ENST00000428736 355 ntBASIC5.16□□□□□ -1.58
CISHQ9NSE2 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CISHQ9NSE2 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.16□□□□□ -1.58
CISHQ9NSE2 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.16□□□□□ -1.58
CISHQ9NSE2 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.16□□□□□ -1.58
CISHQ9NSE2 AC090686.1-201ENST00000481577 749 ntBASIC5.16□□□□□ -1.58
CISHQ9NSE2 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CISHQ9NSE2 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.16□□□□□ -1.58
CISHQ9NSE2 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.16□□□□□ -1.58
CISHQ9NSE2 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.16□□□□□ -1.58
CISHQ9NSE2 GTF2IP11-201ENST00000526931 420 ntBASIC5.16□□□□□ -1.58
CISHQ9NSE2 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CISHQ9NSE2 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.16□□□□□ -1.58
CISHQ9NSE2 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.16□□□□□ -1.58
CISHQ9NSE2 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.16□□□□□ -1.58
CISHQ9NSE2 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.16□□□□□ -1.58
CISHQ9NSE2 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.16□□□□□ -1.58
CISHQ9NSE2 HMGN2P47-201ENST00000559378 272 ntBASIC5.16□□□□□ -1.58
CISHQ9NSE2 MIR4436B2-201ENST00000581415 91 ntBASIC5.16□□□□□ -1.58
CISHQ9NSE2 MIR4436B1-201ENST00000583272 91 ntBASIC5.16□□□□□ -1.58
CISHQ9NSE2 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.16□□□□□ -1.58
CISHQ9NSE2 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.16□□□□□ -1.58
CISHQ9NSE2 AL445528.2-201ENST00000620582 470 ntBASIC5.16□□□□□ -1.58
CISHQ9NSE2 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.16□□□□□ -1.58
CISHQ9NSE2 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CISHQ9NSE2 TLK1P1-201ENST00000456760 2440 ntBASIC5.16□□□□□ -1.58
CISHQ9NSE2 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CISHQ9NSE2 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CISHQ9NSE2 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.16□□□□□ -1.58
CISHQ9NSE2 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CISHQ9NSE2 AC063923.1-201ENST00000478982 1619 ntBASIC5.15□□□□□ -1.58
CISHQ9NSE2 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.15□□□□□ -1.58
CISHQ9NSE2 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CISHQ9NSE2 AP005435.3-201ENST00000531260 3198 ntBASIC5.15□□□□□ -1.58
CISHQ9NSE2 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
CISHQ9NSE2 AL672167.1-204ENST00000641875 3017 ntBASIC5.15□□□□□ -1.58
CISHQ9NSE2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CISHQ9NSE2 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CISHQ9NSE2 LINC00993-201ENST00000420453 540 ntBASIC5.15□□□□□ -1.59
CISHQ9NSE2 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.15□□□□□ -1.59
CISHQ9NSE2 AL645608.4-201ENST00000423619 154 ntBASIC5.15□□□□□ -1.59
CISHQ9NSE2 AC006455.6-201ENST00000426192 893 ntBASIC5.15□□□□□ -1.59
CISHQ9NSE2 AL451139.1-201ENST00000434718 346 ntBASIC5.15□□□□□ -1.59
CISHQ9NSE2 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.15□□□□□ -1.59
CISHQ9NSE2 OTX2P1-201ENST00000450956 354 ntBASIC5.15□□□□□ -1.59
CISHQ9NSE2 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.15□□□□□ -1.59
CISHQ9NSE2 AL356390.1-201ENST00000455684 397 ntBASIC5.15□□□□□ -1.59
CISHQ9NSE2 RPS3AP41-201ENST00000462701 778 ntBASIC5.15□□□□□ -1.59
CISHQ9NSE2 RN7SL591P-201ENST00000496150 292 ntBASIC5.15□□□□□ -1.59
CISHQ9NSE2 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.15□□□□□ -1.59
CISHQ9NSE2 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.15□□□□□ -1.59
CISHQ9NSE2 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.15□□□□□ -1.59
CISHQ9NSE2 BUD31P1-201ENST00000521828 359 ntBASIC5.15□□□□□ -1.59
CISHQ9NSE2 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.15□□□□□ -1.59
CISHQ9NSE2 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.15□□□□□ -1.59
CISHQ9NSE2 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.15□□□□□ -1.59
CISHQ9NSE2 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.15□□□□□ -1.59
CISHQ9NSE2 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.15□□□□□ -1.59
CISHQ9NSE2 AC093249.4-201ENST00000564755 259 ntBASIC5.15□□□□□ -1.59
CISHQ9NSE2 RN7SL802P-201ENST00000577858 299 ntBASIC5.15□□□□□ -1.59
CISHQ9NSE2 MIR3934-201ENST00000579806 107 ntBASIC5.15□□□□□ -1.59
CISHQ9NSE2 AC022726.1-201ENST00000587475 207 ntBASIC5.15□□□□□ -1.59
CISHQ9NSE2 AL031320.1-201ENST00000604177 357 ntBASIC5.15□□□□□ -1.59
CISHQ9NSE2 AC005084.1-201ENST00000605160 304 ntBASIC5.15□□□□□ -1.59
CISHQ9NSE2 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.15□□□□□ -1.59
CISHQ9NSE2 AC006453.5-201ENST00000636451 619 ntBASIC5.15□□□□□ -1.59
CISHQ9NSE2 AC008079.2-201ENST00000623543 20396 ntBASIC5.15□□□□□ -1.59
CISHQ9NSE2 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CISHQ9NSE2 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.15□□□□□ -1.59
CISHQ9NSE2 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.15□□□□□ -1.59
CISHQ9NSE2 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
CISHQ9NSE2 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CISHQ9NSE2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CISHQ9NSE2 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.14□□□□□ -1.59
CISHQ9NSE2 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CISHQ9NSE2 NCLP2-201ENST00000416078 1462 ntBASIC5.14□□□□□ -1.59
CISHQ9NSE2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CISHQ9NSE2 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
CISHQ9NSE2 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CISHQ9NSE2 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.14□□□□□ -1.59
CISHQ9NSE2 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CISHQ9NSE2 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CISHQ9NSE2 AC008549.2-201ENST00000333482 706 ntBASIC5.14□□□□□ -1.59
CISHQ9NSE2 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CISHQ9NSE2 RNA5SP191-201ENST00000362585 102 ntBASIC5.14□□□□□ -1.59
CISHQ9NSE2 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.14□□□□□ -1.59
CISHQ9NSE2 MIR550A3-201ENST00000390735 95 ntBASIC5.14□□□□□ -1.59
CISHQ9NSE2 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.14□□□□□ -1.59
CISHQ9NSE2 EIF4HP2-201ENST00000424380 563 ntBASIC5.14□□□□□ -1.59
CISHQ9NSE2 AC104837.2-201ENST00000427236 424 ntBASIC5.14□□□□□ -1.59
CISHQ9NSE2 NPM1P22-201ENST00000427761 952 ntBASIC5.14□□□□□ -1.59
CISHQ9NSE2 OR2B7P-201ENST00000429302 934 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms