Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 RN7SKP34-201ENST00000516142 244 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AP000926.4-201ENST00000527351 454 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 MTND4LP24-201ENST00000572277 291 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 MTCYBP33-201ENST00000575007 1130 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AC012557.1-201ENST00000607115 611 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AL357562.1-201ENST00000624911 609 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AC117409.1-201ENST00000470499 1310 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AC104454.1-201ENST00000421341 1401 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 MTCO1P11-201ENST00000429111 1528 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 RN7SKP275-201ENST00000364626 301 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 MIR142-201ENST00000384835 87 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 DNAJC19P6-201ENST00000401853 280 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 SFR1P1-201ENST00000403720 688 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AL356131.1-201ENST00000405826 414 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 HNRNPDP2-201ENST00000406475 478 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 BTF3P8-201ENST00000414577 526 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AC093084.1-201ENST00000424233 687 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 FO393419.3-201ENST00000428741 282 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AMYP1-201ENST00000440059 1023 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 RPL5P25-201ENST00000441148 775 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AC015983.1-201ENST00000441577 373 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AL592437.1-201ENST00000443781 492 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 USP9YP25-201ENST00000457708 443 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 RPL12P30-201ENST00000488389 499 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AP002453.1-201ENST00000492327 668 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 RPSAP51-201ENST00000497462 645 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 GCSHP4-201ENST00000538792 439 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AC023813.2-201ENST00000564321 469 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AC124916.2-201ENST00000604416 224 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AL645933.2-201ENST00000606743 1207 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AC109309.2-201ENST00000612597 332 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AC073569.3-201ENST00000619055 682 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AC073488.6-201ENST00000632293 754 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms