Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 AC012512.1-201ENST00000446594 718 ntBASIC5.12□□□□□ -1.59
VPS35Q96QK1 KNOP1P3-201ENST00000446933 426 ntBASIC5.12□□□□□ -1.59
VPS35Q96QK1 AL591623.2-201ENST00000449978 222 ntBASIC5.12□□□□□ -1.59
VPS35Q96QK1 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 AC091917.2-201ENST00000505002 744 ntBASIC5.12□□□□□ -1.59
VPS35Q96QK1 AC008638.1-201ENST00000506035 866 ntBASIC5.12□□□□□ -1.59
VPS35Q96QK1 AC008676.3-201ENST00000521237 435 ntBASIC5.12□□□□□ -1.59
VPS35Q96QK1 OR10G5P-201ENST00000532733 358 ntBASIC5.12□□□□□ -1.59
VPS35Q96QK1 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS35Q96QK1 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 OR11J2P-201ENST00000555298 907 ntBASIC5.12□□□□□ -1.59
VPS35Q96QK1 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 AP005432.2-201ENST00000608162 586 ntBASIC5.12□□□□□ -1.59
VPS35Q96QK1 RPSAP73-201ENST00000614820 330 ntBASIC5.12□□□□□ -1.59
VPS35Q96QK1 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS35Q96QK1 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS35Q96QK1 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 AC114947.2-201ENST00000565748 2125 ntBASIC5.12□□□□□ -1.59
VPS35Q96QK1 RBPJP2-201ENST00000618187 1444 ntBASIC5.12□□□□□ -1.59
VPS35Q96QK1 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS35Q96QK1 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS35Q96QK1 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS35Q96QK1 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS35Q96QK1 AC011755.1-201ENST00000623763 2049 ntBASIC5.11□□□□□ -1.59
VPS35Q96QK1 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS35Q96QK1 RPL23P2-201ENST00000320371 421 ntBASIC5.11□□□□□ -1.59
VPS35Q96QK1 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
VPS35Q96QK1 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VPS35Q96QK1 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.11□□□□□ -1.59
VPS35Q96QK1 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS35Q96QK1 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.11□□□□□ -1.59
VPS35Q96QK1 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.11□□□□□ -1.59
VPS35Q96QK1 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS35Q96QK1 AC046176.1-201ENST00000435260 1170 ntBASIC5.11□□□□□ -1.59
VPS35Q96QK1 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS35Q96QK1 AC108161.1-201ENST00000461060 402 ntBASIC5.11□□□□□ -1.59
VPS35Q96QK1 AC008953.1-201ENST00000497334 318 ntBASIC5.11□□□□□ -1.59
VPS35Q96QK1 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.11□□□□□ -1.59
VPS35Q96QK1 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS35Q96QK1 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS35Q96QK1 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS35Q96QK1 SDR42E1P1-201ENST00000611327 477 ntBASIC5.11□□□□□ -1.59
VPS35Q96QK1 AC026367.3-201ENST00000619032 590 ntBASIC5.11□□□□□ -1.59
VPS35Q96QK1 AL158062.1-201ENST00000619632 745 ntBASIC5.11□□□□□ -1.59
VPS35Q96QK1 FRG1EP-201ENST00000634469 770 ntBASIC5.11□□□□□ -1.59
VPS35Q96QK1 LINC01739-205ENST00000641890 573 ntBASIC5.11□□□□□ -1.59
VPS35Q96QK1 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VPS35Q96QK1 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS35Q96QK1 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
VPS35Q96QK1 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS35Q96QK1 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS35Q96QK1 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS35Q96QK1 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS35Q96QK1 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS35Q96QK1 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VPS35Q96QK1 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
VPS35Q96QK1 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
VPS35Q96QK1 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS35Q96QK1 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS35Q96QK1 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS35Q96QK1 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS35Q96QK1 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS35Q96QK1 RN7SKP113-201ENST00000363891 295 ntBASIC5.1□□□□□ -1.59
VPS35Q96QK1 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS35Q96QK1 OR13C3-201ENST00000374781 1108 ntBASIC5.1□□□□□ -1.59
VPS35Q96QK1 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS35Q96QK1 MIR765-201ENST00000390226 114 ntBASIC5.1□□□□□ -1.59
VPS35Q96QK1 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS35Q96QK1 RCC2P2-201ENST00000422174 918 ntBASIC5.1□□□□□ -1.59
VPS35Q96QK1 AC092447.2-201ENST00000435487 669 ntBASIC5.1□□□□□ -1.59
VPS35Q96QK1 AL138787.1-202ENST00000437804 898 ntBASIC5.1□□□□□ -1.59
VPS35Q96QK1 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS35Q96QK1 RBMY2TP-201ENST00000451162 947 ntBASIC5.1□□□□□ -1.59
VPS35Q96QK1 AC109780.1-201ENST00000451768 1344 ntBASIC5.1□□□□□ -1.59
VPS35Q96QK1 OR52E3P-201ENST00000452083 936 ntBASIC5.1□□□□□ -1.59
VPS35Q96QK1 AC092647.2-201ENST00000452998 253 ntBASIC5.1□□□□□ -1.59
VPS35Q96QK1 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS35Q96QK1 RPS18P6-201ENST00000476880 458 ntBASIC5.1□□□□□ -1.59
VPS35Q96QK1 BX284632.1-201ENST00000478218 541 ntBASIC5.1□□□□□ -1.59
VPS35Q96QK1 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS35Q96QK1 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS35Q96QK1 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.1□□□□□ -1.59
VPS35Q96QK1 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS35Q96QK1 DUX4L52-201ENST00000549363 777 ntBASIC5.1□□□□□ -1.59
VPS35Q96QK1 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms