Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC7Q96M83 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC7Q96M83 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC7Q96M83 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC7Q96M83 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.88□□□□□ -1.31
CCDC7Q96M83 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
CCDC7Q96M83 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC7Q96M83 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC7Q96M83 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC7Q96M83 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CCDC7Q96M83 AL357515.1-201ENST00000402967 542 ntBASIC6.88□□□□□ -1.31
CCDC7Q96M83 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC7Q96M83 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC7Q96M83 RPL6P21-201ENST00000418672 846 ntBASIC6.88□□□□□ -1.31
CCDC7Q96M83 AC013429.2-201ENST00000418798 781 ntBASIC6.88□□□□□ -1.31
CCDC7Q96M83 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC7Q96M83 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC7Q96M83 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC7Q96M83 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC7Q96M83 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC7Q96M83 NDUFA12P1-201ENST00000455914 406 ntBASIC6.88□□□□□ -1.31
CCDC7Q96M83 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC7Q96M83 AP006289.1-201ENST00000538089 277 ntBASIC6.88□□□□□ -1.31
CCDC7Q96M83 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC7Q96M83 MIR5096-201ENST00000583713 70 ntBASIC6.88□□□□□ -1.31
CCDC7Q96M83 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.88□□□□□ -1.31
CCDC7Q96M83 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC7Q96M83 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC7Q96M83 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC7Q96M83 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC7Q96M83 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC7Q96M83 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
CCDC7Q96M83 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CCDC7Q96M83 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CCDC7Q96M83 COX6CP17-201ENST00000421389 185 ntBASIC6.87□□□□□ -1.31
CCDC7Q96M83 OR5M12P-201ENST00000423388 929 ntBASIC6.87□□□□□ -1.31
CCDC7Q96M83 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC7Q96M83 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC7Q96M83 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC7Q96M83 AC112498.1-201ENST00000444401 332 ntBASIC6.87□□□□□ -1.31
CCDC7Q96M83 TPT1P12-201ENST00000448968 492 ntBASIC6.87□□□□□ -1.31
CCDC7Q96M83 AC063943.1-201ENST00000465434 453 ntBASIC6.87□□□□□ -1.31
CCDC7Q96M83 RN7SL385P-201ENST00000468873 276 ntBASIC6.87□□□□□ -1.31
CCDC7Q96M83 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC7Q96M83 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CCDC7Q96M83 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.87□□□□□ -1.31
CCDC7Q96M83 GCSHP4-201ENST00000538792 439 ntBASIC6.87□□□□□ -1.31
CCDC7Q96M83 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC7Q96M83 AC091042.1-201ENST00000579213 173 ntBASIC6.87□□□□□ -1.31
CCDC7Q96M83 MIR3667-201ENST00000581025 74 ntBASIC6.87□□□□□ -1.31
CCDC7Q96M83 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC7Q96M83 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC7Q96M83 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
CCDC7Q96M83 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.87□□□□□ -1.31
CCDC7Q96M83 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC7Q96M83 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC7Q96M83 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CCDC7Q96M83 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC7Q96M83 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
CCDC7Q96M83 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC7Q96M83 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC7Q96M83 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC7Q96M83 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC7Q96M83 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC7Q96M83 AC126755.2-208ENST00000327792 462 ntBASIC6.86□□□□□ -1.31
CCDC7Q96M83 AC138969.1-213ENST00000331436 462 ntBASIC6.86□□□□□ -1.31
CCDC7Q96M83 RNA5SP345-201ENST00000410646 108 ntBASIC6.86□□□□□ -1.31
CCDC7Q96M83 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.86□□□□□ -1.31
CCDC7Q96M83 AL137845.2-201ENST00000444292 988 ntBASIC6.86□□□□□ -1.31
CCDC7Q96M83 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC7Q96M83 RN7SL517P-201ENST00000462240 305 ntBASIC6.86□□□□□ -1.31
CCDC7Q96M83 AC092905.1-201ENST00000467527 949 ntBASIC6.86□□□□□ -1.31
CCDC7Q96M83 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.86□□□□□ -1.31
CCDC7Q96M83 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC7Q96M83 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CCDC7Q96M83 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC7Q96M83 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CCDC7Q96M83 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CCDC7Q96M83 AL731532.2-201ENST00000623542 1953 ntBASIC6.86□□□□□ -1.31
CCDC7Q96M83 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC7Q96M83 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC7Q96M83 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CCDC7Q96M83 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC7Q96M83 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
CCDC7Q96M83 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.85□□□□□ -1.31
CCDC7Q96M83 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC7Q96M83 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC7Q96M83 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
CCDC7Q96M83 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CCDC7Q96M83 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC7Q96M83 RPS16P5-201ENST00000406501 404 ntBASIC6.85□□□□□ -1.31
CCDC7Q96M83 GTF2IP5-201ENST00000414608 731 ntBASIC6.85□□□□□ -1.31
CCDC7Q96M83 AC007559.1-201ENST00000428736 355 ntBASIC6.85□□□□□ -1.31
CCDC7Q96M83 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC7Q96M83 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC7Q96M83 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC7Q96M83 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC7Q96M83 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC7Q96M83 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.85□□□□□ -1.31
CCDC7Q96M83 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms