Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL034546.1-201ENST00000623740 3693 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 MTND5P31-201ENST00000419366 1374 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 MIR375-201ENST00000362103 64 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 SNORA64.1-201ENST00000362600 132 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 RNU4-7P-201ENST00000364758 141 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 RNF10P1-201ENST00000418589 369 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 PTP4A1P1-201ENST00000420539 515 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 REREP1Y-201ENST00000422655 198 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AC104843.2-201ENST00000427666 297 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 MTND6P12-201ENST00000428247 522 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 REREP2Y-201ENST00000439103 200 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 EEF1A1P39-201ENST00000440791 250 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 CASP3P1-201ENST00000446037 609 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AL035407.2-201ENST00000454090 378 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 RPS23P6-201ENST00000466136 431 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AC022215.1-201ENST00000481770 362 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 SNORA3.4-201ENST00000515969 96 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 SNORD46.2-201ENST00000516021 102 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 HIGD1AP18-201ENST00000520730 278 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AC016839.1-201ENST00000578162 867 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AL049844.2-201ENST00000604280 628 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AC011374.2-201ENST00000607135 526 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 OR2BH1P-201ENST00000608850 864 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AC096586.1-201ENST00000610267 561 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 CASC19-281ENST00000642118 1554 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 RN7SKP292-201ENST00000365522 317 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 RN7SKP269-201ENST00000365545 319 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 RNA5SP30-201ENST00000365552 115 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 RNA5SP284-201ENST00000384547 118 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 SNORD65C-201ENST00000390962 71 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AL031985.1-201ENST00000392713 418 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 RN7SKP278-201ENST00000410504 342 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 BTF3P8-201ENST00000414577 526 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AC246680.2-201ENST00000422106 389 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 PRUNEP1-201ENST00000425846 705 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AL445665.1-202ENST00000452436 324 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 MEMO1P4-201ENST00000453590 386 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AC021205.1-201ENST00000468797 348 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AC004815.1-201ENST00000484185 331 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 DUTP1-201ENST00000493631 470 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AC119751.1-201ENST00000513357 765 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 MRPS36P3-201ENST00000519284 130 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 IGKV3D-34-201ENST00000522638 302 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms