Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL596448.1-201ENST00000415024 392 ntBASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 RPS27AP6-201ENST00000427962 448 ntBASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 RPL7P33-201ENST00000444159 742 ntBASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 HMGB1P26-201ENST00000452520 628 ntBASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 RPL35AP19-201ENST00000469425 329 ntBASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 CBX1P5-201ENST00000475330 559 ntBASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 AC107398.1-201ENST00000486904 505 ntBASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 RN7SL466P-201ENST00000497546 295 ntBASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 RNU6-1308P-201ENST00000516817 103 ntBASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 MRPS21P7-201ENST00000566937 238 ntBASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 MIR7853-201ENST00000584820 132 ntBASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 AL359513.1-201ENST00000614364 557 ntBASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 AL691477.1-201ENST00000624398 162 ntBASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 OR4G3P-201ENST00000633500 913 ntBASIC6.65□□□□□ -1.34
CHMP4CQ96CF2 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CHMP4CQ96CF2 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
CHMP4CQ96CF2 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.65□□□□□ -1.35
CHMP4CQ96CF2 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CHMP4CQ96CF2 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 ATP5HP3-201ENST00000396994 486 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 AL391361.1-201ENST00000405580 489 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 RNU4-74P-201ENST00000411280 161 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 SDHDP6-201ENST00000414693 480 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 AL133173.1-201ENST00000423458 397 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 HMGB3P10-201ENST00000434734 572 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 HMGB1P5-202ENST00000451497 985 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 RPS27AP2-201ENST00000457576 465 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 AC021205.1-201ENST00000468797 348 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 RPS17P11-201ENST00000474297 293 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 AC087672.1-201ENST00000479876 766 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 AC010476.1-201ENST00000519111 851 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 AL049870.4-201ENST00000555741 486 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 AGGF1P9-201ENST00000561884 913 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 AC012557.1-201ENST00000607115 611 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 MIR6768-201ENST00000610734 72 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 AC079395.2-201ENST00000610982 737 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 RNU6-1192P-201ENST00000612197 107 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 AC007786.3-201ENST00000615154 596 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 MIR6826-201ENST00000617808 98 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 RNU6-489P-201ENST00000618289 107 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 uc_338.7-201ENST00000621834 124 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 RARSP1-201ENST00000542842 1418 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 HSPA8P14-201ENST00000552265 1805 ntBASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CHMP4CQ96CF2 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 RNU6-468P-201ENST00000384003 109 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 RNU6-481P-201ENST00000384194 107 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AC005042.1-201ENST00000393397 800 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 HMGB3P19-201ENST00000403971 560 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AL158825.1-201ENST00000414735 521 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AC008173.1-201ENST00000418901 264 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 HSPE1P16-201ENST00000426640 348 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AL121776.1-201ENST00000429337 372 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms