Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 IQCB2P-201ENST00000401788 1633 ntBASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 MIR589-201ENST00000385238 99 ntBASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 RPL12P43-201ENST00000420608 499 ntBASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 AC007064.3-201ENST00000422608 359 ntBASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 TXNP2-201ENST00000443918 295 ntBASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 AC009127.1-201ENST00000467090 155 ntBASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 RPS4XP20-201ENST00000505751 772 ntBASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 AC005000.1-201ENST00000536192 288 ntBASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 AC006349.1-201ENST00000555526 235 ntBASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 AC105129.1-201ENST00000560250 297 ntBASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 NDUFB4P11-201ENST00000560510 395 ntBASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 BNIP3P22-201ENST00000593399 556 ntBASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 AC068790.4-201ENST00000602474 263 ntBASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 AC018695.5-201ENST00000605872 315 ntBASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 AC012414.7-202ENST00000622705 1090 ntBASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 AC016717.3-201ENST00000624730 554 ntBASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 AC068724.3-201ENST00000625906 87 ntBASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.1□□□□□ -1.59
SHROOM3Q8TF72 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 SNORA57.1-201ENST00000391227 145 ntBASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 U3.30-201ENST00000391308 210 ntBASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 AC104333.2-201ENST00000422630 192 ntBASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 GTF2IP2-201ENST00000424290 697 ntBASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 RPS29P9-201ENST00000440360 171 ntBASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 AC010733.1-201ENST00000451515 401 ntBASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 RPS29P33-201ENST00000456717 146 ntBASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 ENPP7P9-201ENST00000514456 627 ntBASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 C1GALT1P3-201ENST00000522049 819 ntBASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 AC011453.2-201ENST00000603737 729 ntBASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 AC092653.1-201ENST00000608509 531 ntBASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 AC008833.1-201ENST00000611633 691 ntBASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 AP000648.2-201ENST00000624182 404 ntBASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 INTS6P1-201ENST00000504674 2530 ntBASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.09□□□□□ -1.59
SHROOM3Q8TF72 AC004656.1-201ENST00000568479 4951 ntBASIC5.09□□□□□ -1.6
SHROOM3Q8TF72 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SHROOM3Q8TF72 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SHROOM3Q8TF72 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SHROOM3Q8TF72 OR51B3P-201ENST00000412287 913 ntBASIC5.09□□□□□ -1.6
SHROOM3Q8TF72 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.09□□□□□ -1.6
SHROOM3Q8TF72 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.09□□□□□ -1.6
SHROOM3Q8TF72 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.09□□□□□ -1.6
SHROOM3Q8TF72 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.09□□□□□ -1.6
SHROOM3Q8TF72 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.09□□□□□ -1.6
SHROOM3Q8TF72 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.09□□□□□ -1.6
SHROOM3Q8TF72 AC009117.1-201ENST00000563948 554 ntBASIC5.09□□□□□ -1.6
SHROOM3Q8TF72 AC011447.4-201ENST00000587562 111 ntBASIC5.09□□□□□ -1.6
SHROOM3Q8TF72 AC105254.2-201ENST00000603636 436 ntBASIC5.09□□□□□ -1.6
SHROOM3Q8TF72 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 SNORA66-201ENST00000384792 133 ntBASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 SSR1P1-201ENST00000407630 814 ntBASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 CTSL3P-202ENST00000412179 788 ntBASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 AC068138.1-201ENST00000412635 217 ntBASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 AC009238.2-201ENST00000431026 355 ntBASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 AC103987.1-201ENST00000473394 348 ntBASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 AC140172.1-201ENST00000502928 141 ntBASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 PARP1P2-201ENST00000556806 195 ntBASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 AL031320.1-201ENST00000604177 357 ntBASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 AC099494.2-201ENST00000623371 978 ntBASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 THAP12P4-201ENST00000528321 2266 ntBASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms