Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 DUTP5-201ENST00000406790 469 ntBASIC5.25□□□□□ -1.57
LRRC38Q5VT99 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 NPM1P4-201ENST00000414095 812 ntBASIC5.25□□□□□ -1.57
LRRC38Q5VT99 TMBIM7P-201ENST00000418074 855 ntBASIC5.25□□□□□ -1.57
LRRC38Q5VT99 DDX39BP1-205ENST00000422507 192 ntBASIC5.25□□□□□ -1.57
LRRC38Q5VT99 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 AL354714.3-201ENST00000447284 493 ntBASIC5.25□□□□□ -1.57
LRRC38Q5VT99 AC093166.2-201ENST00000455969 1017 ntBASIC5.25□□□□□ -1.57
LRRC38Q5VT99 RN7SL517P-201ENST00000462240 305 ntBASIC5.25□□□□□ -1.57
LRRC38Q5VT99 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 AC012339.2-201ENST00000523996 453 ntBASIC5.25□□□□□ -1.57
LRRC38Q5VT99 BNIP3P1-201ENST00000547295 580 ntBASIC5.25□□□□□ -1.57
LRRC38Q5VT99 FAM106CP-201ENST00000582212 507 ntBASIC5.25□□□□□ -1.57
LRRC38Q5VT99 AC010487.1-201ENST00000594408 1172 ntBASIC5.25□□□□□ -1.57
LRRC38Q5VT99 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 AC099494.2-201ENST00000623371 978 ntBASIC5.25□□□□□ -1.57
LRRC38Q5VT99 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 AL049767.1-202ENST00000637826 242 ntBASIC5.25□□□□□ -1.57
LRRC38Q5VT99 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.25□□□□□ -1.57
LRRC38Q5VT99 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 RNU1-43P-201ENST00000365052 165 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 MIR7-1-201ENST00000384871 110 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 RNU6-1320P-201ENST00000390838 107 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 RNU6-1269P-201ENST00000391139 107 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 AC002069.1-201ENST00000429649 1159 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 MTCO1P45-201ENST00000431457 267 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 NDUFA5P1-201ENST00000433858 341 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 AL691482.1-201ENST00000453255 87 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 RNU6-599P-201ENST00000459383 107 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 RNU6-1193P-201ENST00000459461 107 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 AC097484.1-201ENST00000471148 389 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 OR2AO1P-201ENST00000476497 403 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 HMGB3P16-201ENST00000508037 287 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 AP002373.2-201ENST00000541631 1060 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 AC073575.2-201ENST00000614212 627 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 AC037198.3-201ENST00000616754 526 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 RNU6-368P-201ENST00000620928 107 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 RNU6-538P-201ENST00000622329 107 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 AL672167.1-204ENST00000641875 3017 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 AC093849.1-201ENST00000563631 2209 ntBASIC5.24□□□□□ -1.57
LRRC38Q5VT99 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.24□□□□□ -1.57
LRRC38Q5VT99 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LRRC38Q5VT99 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.23□□□□□ -1.57
LRRC38Q5VT99 BRAFP1-201ENST00000445336 2703 ntBASIC5.23□□□□□ -1.57
LRRC38Q5VT99 AC010132.2-201ENST00000295493 1043 ntBASIC5.23□□□□□ -1.57
LRRC38Q5VT99 SNORA73.1-201ENST00000363107 205 ntBASIC5.23□□□□□ -1.57
LRRC38Q5VT99 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.23□□□□□ -1.57
LRRC38Q5VT99 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.23□□□□□ -1.57
LRRC38Q5VT99 QRSL1P2-201ENST00000418582 964 ntBASIC5.23□□□□□ -1.57
LRRC38Q5VT99 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms