Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AL161616.1-201ENST00000611867 286 ntBASIC5.99□□□□□ -1.45
RFX7Q2KHR2 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFX7Q2KHR2 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFX7Q2KHR2 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
RFX7Q2KHR2 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RFX7Q2KHR2 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFX7Q2KHR2 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RFX7Q2KHR2 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFX7Q2KHR2 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFX7Q2KHR2 AC079741.1-201ENST00000321498 212 ntBASIC5.98□□□□□ -1.45
RFX7Q2KHR2 RNA5SP505-201ENST00000364748 108 ntBASIC5.98□□□□□ -1.45
RFX7Q2KHR2 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFX7Q2KHR2 RNU6-398P-201ENST00000384143 109 ntBASIC5.98□□□□□ -1.45
RFX7Q2KHR2 AC016397.1-201ENST00000412463 242 ntBASIC5.98□□□□□ -1.45
RFX7Q2KHR2 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.98□□□□□ -1.45
RFX7Q2KHR2 SCAND3P1-201ENST00000439854 1060 ntBASIC5.98□□□□□ -1.45
RFX7Q2KHR2 CEACAMP9-201ENST00000442990 513 ntBASIC5.98□□□□□ -1.45
RFX7Q2KHR2 RN7SL738P-201ENST00000470264 297 ntBASIC5.98□□□□□ -1.45
RFX7Q2KHR2 RN7SL346P-201ENST00000491561 294 ntBASIC5.98□□□□□ -1.45
RFX7Q2KHR2 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.98□□□□□ -1.45
RFX7Q2KHR2 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.98□□□□□ -1.45
RFX7Q2KHR2 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.98□□□□□ -1.45
RFX7Q2KHR2 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.98□□□□□ -1.45
RFX7Q2KHR2 MORF4L1P3-201ENST00000525966 950 ntBASIC5.98□□□□□ -1.45
RFX7Q2KHR2 MIR4270-201ENST00000581799 70 ntBASIC5.98□□□□□ -1.45
RFX7Q2KHR2 AC209154.1-201ENST00000582156 337 ntBASIC5.98□□□□□ -1.45
RFX7Q2KHR2 AL049794.2-201ENST00000616301 365 ntBASIC5.98□□□□□ -1.45
RFX7Q2KHR2 AC087821.1-201ENST00000623639 567 ntBASIC5.98□□□□□ -1.45
RFX7Q2KHR2 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.98□□□□□ -1.45
RFX7Q2KHR2 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFX7Q2KHR2 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.98□□□□□ -1.45
RFX7Q2KHR2 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFX7Q2KHR2 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFX7Q2KHR2 SMG1P6-201ENST00000532337 2930 ntBASIC5.98□□□□□ -1.45
RFX7Q2KHR2 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFX7Q2KHR2 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFX7Q2KHR2 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 AC009643.2-201ENST00000603543 1448 ntBASIC5.97□□□□□ -1.45
RFX7Q2KHR2 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 RNA5SP191-201ENST00000362585 102 ntBASIC5.97□□□□□ -1.45
RFX7Q2KHR2 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 AL021331.1-201ENST00000402817 582 ntBASIC5.97□□□□□ -1.45
RFX7Q2KHR2 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 AC073052.1-201ENST00000440417 714 ntBASIC5.97□□□□□ -1.45
RFX7Q2KHR2 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 Y_RNA.719-201ENST00000517156 106 ntBASIC5.97□□□□□ -1.45
RFX7Q2KHR2 AC026688.1-201ENST00000520639 1168 ntBASIC5.97□□□□□ -1.45
RFX7Q2KHR2 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 AC079075.1-201ENST00000559543 878 ntBASIC5.97□□□□□ -1.45
RFX7Q2KHR2 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 RN7SL690P-201ENST00000582087 240 ntBASIC5.97□□□□□ -1.45
RFX7Q2KHR2 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 AC020910.3-201ENST00000603701 874 ntBASIC5.97□□□□□ -1.45
RFX7Q2KHR2 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFX7Q2KHR2 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
RFX7Q2KHR2 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RFX7Q2KHR2 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.45
RFX7Q2KHR2 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RFX7Q2KHR2 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
RFX7Q2KHR2 RNA5SP345-201ENST00000410646 108 ntBASIC5.96□□□□□ -1.45
RFX7Q2KHR2 NPM1P40-201ENST00000412758 733 ntBASIC5.96□□□□□ -1.45
RFX7Q2KHR2 AC013429.2-201ENST00000418798 781 ntBASIC5.96□□□□□ -1.45
RFX7Q2KHR2 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.96□□□□□ -1.45
RFX7Q2KHR2 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.96□□□□□ -1.45
RFX7Q2KHR2 AL359265.2-201ENST00000434367 631 ntBASIC5.96□□□□□ -1.45
RFX7Q2KHR2 PRPF38AP2-201ENST00000438179 851 ntBASIC5.96□□□□□ -1.45
RFX7Q2KHR2 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.96□□□□□ -1.45
RFX7Q2KHR2 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.96□□□□□ -1.45
RFX7Q2KHR2 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.96□□□□□ -1.45
RFX7Q2KHR2 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.96□□□□□ -1.45
RFX7Q2KHR2 RPL5P22-201ENST00000480199 884 ntBASIC5.96□□□□□ -1.45
RFX7Q2KHR2 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.96□□□□□ -1.45
RFX7Q2KHR2 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.96□□□□□ -1.45
RFX7Q2KHR2 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.96□□□□□ -1.45
RFX7Q2KHR2 AL512782.1-201ENST00000603093 364 ntBASIC5.96□□□□□ -1.45
RFX7Q2KHR2 MIR378J-201ENST00000611988 109 ntBASIC5.96□□□□□ -1.45
RFX7Q2KHR2 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.96□□□□□ -1.45
RFX7Q2KHR2 AC019206.1-201ENST00000621938 425 ntBASIC5.96□□□□□ -1.45
RFX7Q2KHR2 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
RFX7Q2KHR2 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.96□□□□□ -1.46
RFX7Q2KHR2 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RFX7Q2KHR2 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
RFX7Q2KHR2 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFX7Q2KHR2 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFX7Q2KHR2 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
RFX7Q2KHR2 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFX7Q2KHR2 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RFX7Q2KHR2 AC008758.3-201ENST00000507003 1829 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms