Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.82□□□□□ -1.32
SOX4Q06945 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SOX4Q06945 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.82□□□□□ -1.32
SOX4Q06945 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SOX4Q06945 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.82□□□□□ -1.32
SOX4Q06945 AP003486.1-201ENST00000525716 3994 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SOX4Q06945 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SOX4Q06945 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SOX4Q06945 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SOX4Q06945 AC119674.1-202ENST00000641333 1860 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
SOX4Q06945 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SOX4Q06945 RNU6-181P-201ENST00000363225 107 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 RNA5SP346-201ENST00000363541 121 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 Y_RNA.256-201ENST00000364594 104 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 RNU6-348P-201ENST00000384386 107 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 AL121977.1-201ENST00000401636 979 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 MIR1277-201ENST00000408536 78 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 U3.43-201ENST00000410734 213 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 NRBF2P2-201ENST00000413087 861 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC6.82□□□□□ -1.32
SOX4Q06945 AC002069.1-201ENST00000429649 1159 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SOX4Q06945 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.82□□□□□ -1.32
SOX4Q06945 MTCO3P18-201ENST00000440206 761 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 AC092170.1-201ENST00000440211 356 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 AL645936.1-201ENST00000441979 518 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.82□□□□□ -1.32
SOX4Q06945 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC6.82□□□□□ -1.32
SOX4Q06945 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SOX4Q06945 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.82□□□□□ -1.32
SOX4Q06945 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SOX4Q06945 RPL5P13-201ENST00000462840 709 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.82□□□□□ -1.32
SOX4Q06945 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC6.82□□□□□ -1.32
SOX4Q06945 AC025459.1-201ENST00000504072 156 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 AC006499.5-201ENST00000505037 514 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.82□□□□□ -1.32
SOX4Q06945 IGBP1P5-201ENST00000507524 1000 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 KHDC1P1-201ENST00000511053 508 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 AC025465.4-201ENST00000513422 638 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 AC046134.1-201ENST00000514454 666 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC6.82□□□□□ -1.32
SOX4Q06945 RN7SKP35-201ENST00000517210 151 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 IGKV1D-22-201ENST00000518953 324 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.82□□□□□ -1.32
SOX4Q06945 TOMM20P1-201ENST00000534518 427 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.82□□□□□ -1.32
SOX4Q06945 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SOX4Q06945 AC002519.2-203ENST00000567043 837 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 MRPS21P8-201ENST00000569196 235 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 RN7SL366P-201ENST00000577957 292 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 MIR5095-201ENST00000578844 88 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.82□□□□□ -1.32
SOX4Q06945 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.82□□□□□ -1.32
SOX4Q06945 AP000907.4-201ENST00000604143 237 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 AC009220.3-201ENST00000604318 586 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 AC009994.1-201ENST00000606889 253 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 AC099676.1-201ENST00000608886 657 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 AC104260.1-201ENST00000616660 539 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 AC012414.7-202ENST00000622705 1090 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SOX4Q06945 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.82□□□□□ -1.32
SOX4Q06945 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SOX4Q06945 AC087821.2-201ENST00000637086 450 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 AC099063.3-201ENST00000642066 185 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SOX4Q06945 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SOX4Q06945 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
SOX4Q06945 CASC19-206ENST00000641028 1430 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.82□□□□□ -1.32
SOX4Q06945 CUBNP3-201ENST00000457461 1784 ntBASIC6.82□□□□□ -1.32
SOX4Q06945 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC6.82□□□□□ -1.32
SOX4Q06945 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.82□□□□□ -1.32
SOX4Q06945 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.82□□□□□ -1.32
SOX4Q06945 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
SOX4Q06945 AC092646.2-201ENST00000431242 2095 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.81□□□□□ -1.32
SOX4Q06945 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC6.81□□□□□ -1.32
SOX4Q06945 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
SOX4Q06945 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SOX4Q06945 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.81□□□□□ -1.32
SOX4Q06945 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SOX4Q06945 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
SOX4Q06945 AC025809.2-201ENST00000625085 1802 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX4Q06945 AC104966.1-201ENST00000467010 1464 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
SOX4Q06945 TNPO1P2-201ENST00000426249 2665 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 UGT2B27P-201ENST00000505092 1620 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.81□□□□□ -1.32
SOX4Q06945 AC010132.2-201ENST00000295493 1043 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX4Q06945 RNA5SP188-201ENST00000362916 129 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SOX4Q06945 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
SOX4Q06945 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX4Q06945 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms