Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ZDHHC20P1-204ENST00000435787 423 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 RPS29P10-201ENST00000439197 166 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 BTF3P6-201ENST00000448054 499 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 RPL7P45-201ENST00000455851 743 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AL445433.1-201ENST00000457507 257 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AC107015.1-201ENST00000466902 747 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AL133445.1-201ENST00000467051 452 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 RN7SL466P-201ENST00000497546 295 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 RPEP1-201ENST00000504507 658 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 HMGB3P13-201ENST00000511263 607 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AC006427.1-201ENST00000514359 712 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 RFPL4AP3-201ENST00000515267 345 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AC012400.1-201ENST00000518452 381 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 ASB8-215ENST00000540782 659 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 PDCD5P1-201ENST00000543528 309 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 CD24P2-201ENST00000565486 219 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 SUGT1P3-202ENST00000604259 383 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AL158196.1-201ENST00000616786 434 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AC126175.1-201ENST00000617041 758 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AC009237.17-201ENST00000618111 748 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AC005840.5-201ENST00000619166 599 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AC092747.4-201ENST00000620519 1861 ntBASIC3.9□□□□□ -1.79
HIST1H1AQ02539 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.9□□□□□ -1.79
HIST1H1AQ02539 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 RLIMP2-201ENST00000427891 1563 ntBASIC3.89□□□□□ -1.79
HIST1H1AQ02539 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.89□□□□□ -1.79
HIST1H1AQ02539 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 IL6STP1-201ENST00000346911 1020 ntBASIC3.89□□□□□ -1.79
HIST1H1AQ02539 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 RNU1-74P-201ENST00000384108 171 ntBASIC3.89□□□□□ -1.79
HIST1H1AQ02539 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 VN1R3-201ENST00000418822 919 ntBASIC3.89□□□□□ -1.79
HIST1H1AQ02539 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 PPIAP19-201ENST00000486414 492 ntBASIC3.89□□□□□ -1.79
HIST1H1AQ02539 RN7SL547P-201ENST00000490793 290 ntBASIC3.89□□□□□ -1.79
HIST1H1AQ02539 AC073073.1-201ENST00000493920 463 ntBASIC3.89□□□□□ -1.79
HIST1H1AQ02539 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 AC090568.1-201ENST00000509499 856 ntBASIC3.89□□□□□ -1.79
HIST1H1AQ02539 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 NPM1P6-201ENST00000521088 871 ntBASIC3.89□□□□□ -1.79
HIST1H1AQ02539 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 AC008814.1-201ENST00000603797 406 ntBASIC3.89□□□□□ -1.79
HIST1H1AQ02539 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 RNA5SP440-201ENST00000612665 119 ntBASIC3.89□□□□□ -1.79
HIST1H1AQ02539 AC118658.2-201ENST00000618697 459 ntBASIC3.89□□□□□ -1.79
HIST1H1AQ02539 AP002967.1-201ENST00000624203 539 ntBASIC3.89□□□□□ -1.79
HIST1H1AQ02539 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 CYP4F35P-202ENST00000636121 390 ntBASIC3.89□□□□□ -1.79
HIST1H1AQ02539 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 AC092435.4-201ENST00000623012 4159 ntBASIC3.89□□□□□ -1.79
HIST1H1AQ02539 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 AC091046.3-201ENST00000631455 1574 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms