Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.99□□□□□ -1.61
CDKL1Q00532 RPL7AP61-201ENST00000443410 636 ntBASIC4.99□□□□□ -1.61
CDKL1Q00532 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.99□□□□□ -1.61
CDKL1Q00532 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.99□□□□□ -1.61
CDKL1Q00532 AC091180.1-201ENST00000462104 372 ntBASIC4.99□□□□□ -1.61
CDKL1Q00532 AL591473.1-201ENST00000464297 313 ntBASIC4.99□□□□□ -1.61
CDKL1Q00532 RN7SL443P-201ENST00000464331 290 ntBASIC4.99□□□□□ -1.61
CDKL1Q00532 AC105918.1-201ENST00000474399 838 ntBASIC4.99□□□□□ -1.61
CDKL1Q00532 AC098583.1-201ENST00000480875 255 ntBASIC4.99□□□□□ -1.61
CDKL1Q00532 AC073073.1-201ENST00000493920 463 ntBASIC4.99□□□□□ -1.61
CDKL1Q00532 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.99□□□□□ -1.61
CDKL1Q00532 ATG10-AS1-201ENST00000504846 648 ntBASIC4.99□□□□□ -1.61
CDKL1Q00532 AC106872.4-201ENST00000510050 523 ntBASIC4.99□□□□□ -1.61
CDKL1Q00532 RNA5SP303-201ENST00000516192 130 ntBASIC4.99□□□□□ -1.61
CDKL1Q00532 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDKL1Q00532 BNIP3P1-201ENST00000547295 580 ntBASIC4.99□□□□□ -1.61
CDKL1Q00532 NDUFB4P11-201ENST00000560510 395 ntBASIC4.99□□□□□ -1.61
CDKL1Q00532 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.99□□□□□ -1.61
CDKL1Q00532 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.99□□□□□ -1.61
CDKL1Q00532 AL512329.2-201ENST00000607350 548 ntBASIC4.99□□□□□ -1.61
CDKL1Q00532 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDKL1Q00532 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.99□□□□□ -1.61
CDKL1Q00532 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDKL1Q00532 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDKL1Q00532 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDKL1Q00532 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDKL1Q00532 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDKL1Q00532 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CDKL1Q00532 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CDKL1Q00532 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDKL1Q00532 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.98□□□□□ -1.61
CDKL1Q00532 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDKL1Q00532 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDKL1Q00532 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.98□□□□□ -1.61
CDKL1Q00532 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.98□□□□□ -1.61
CDKL1Q00532 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDKL1Q00532 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CDKL1Q00532 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.98□□□□□ -1.61
CDKL1Q00532 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDKL1Q00532 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.98□□□□□ -1.61
CDKL1Q00532 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDKL1Q00532 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CDKL1Q00532 RNU6-618P-201ENST00000363518 112 ntBASIC4.98□□□□□ -1.61
CDKL1Q00532 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDKL1Q00532 MIR1286-201ENST00000408112 78 ntBASIC4.98□□□□□ -1.61
CDKL1Q00532 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.98□□□□□ -1.61
CDKL1Q00532 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.98□□□□□ -1.61
CDKL1Q00532 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.98□□□□□ -1.61
CDKL1Q00532 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.98□□□□□ -1.61
CDKL1Q00532 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.98□□□□□ -1.61
CDKL1Q00532 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.98□□□□□ -1.61
CDKL1Q00532 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.98□□□□□ -1.61
CDKL1Q00532 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.98□□□□□ -1.61
CDKL1Q00532 KNOP1P3-201ENST00000446933 426 ntBASIC4.98□□□□□ -1.61
CDKL1Q00532 AC239798.3-201ENST00000454459 408 ntBASIC4.98□□□□□ -1.61
CDKL1Q00532 RPL31P53-201ENST00000457065 348 ntBASIC4.98□□□□□ -1.61
CDKL1Q00532 COPS8P2-201ENST00000473228 627 ntBASIC4.98□□□□□ -1.61
CDKL1Q00532 AC117394.1-201ENST00000477323 567 ntBASIC4.98□□□□□ -1.61
CDKL1Q00532 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.98□□□□□ -1.61
CDKL1Q00532 BTG4P1-201ENST00000510421 183 ntBASIC4.98□□□□□ -1.61
CDKL1Q00532 AC138938.1-201ENST00000515431 782 ntBASIC4.98□□□□□ -1.61
CDKL1Q00532 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.98□□□□□ -1.61
CDKL1Q00532 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.98□□□□□ -1.61
CDKL1Q00532 AL390726.5-202ENST00000564800 256 ntBASIC4.98□□□□□ -1.61
CDKL1Q00532 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDKL1Q00532 MIR3176-201ENST00000582210 90 ntBASIC4.98□□□□□ -1.61
CDKL1Q00532 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.98□□□□□ -1.61
CDKL1Q00532 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.98□□□□□ -1.61
CDKL1Q00532 MIR6768-201ENST00000610734 72 ntBASIC4.98□□□□□ -1.61
CDKL1Q00532 AC008115.4-201ENST00000619780 775 ntBASIC4.98□□□□□ -1.61
CDKL1Q00532 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.98□□□□□ -1.61
CDKL1Q00532 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.98□□□□□ -1.61
CDKL1Q00532 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CDKL1Q00532 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.98□□□□□ -1.61
CDKL1Q00532 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDKL1Q00532 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.98□□□□□ -1.61
CDKL1Q00532 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.98□□□□□ -1.61
CDKL1Q00532 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
CDKL1Q00532 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDKL1Q00532 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDKL1Q00532 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDKL1Q00532 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CDKL1Q00532 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.97□□□□□ -1.61
CDKL1Q00532 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDKL1Q00532 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.97□□□□□ -1.61
CDKL1Q00532 RNU1-43P-201ENST00000365052 165 ntBASIC4.97□□□□□ -1.61
CDKL1Q00532 DUTP5-201ENST00000406790 469 ntBASIC4.97□□□□□ -1.61
CDKL1Q00532 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.97□□□□□ -1.61
CDKL1Q00532 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.97□□□□□ -1.61
CDKL1Q00532 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CDKL1Q00532 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.97□□□□□ -1.61
CDKL1Q00532 AJ239321.1-201ENST00000424255 564 ntBASIC4.97□□□□□ -1.61
CDKL1Q00532 RPL35AP21-201ENST00000437667 333 ntBASIC4.97□□□□□ -1.61
CDKL1Q00532 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.97□□□□□ -1.61
CDKL1Q00532 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.97□□□□□ -1.61
CDKL1Q00532 MRPL35P2-201ENST00000448009 511 ntBASIC4.97□□□□□ -1.61
CDKL1Q00532 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.97□□□□□ -1.61
CDKL1Q00532 RN7SL346P-201ENST00000491561 294 ntBASIC4.97□□□□□ -1.61
CDKL1Q00532 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.97□□□□□ -1.61
CDKL1Q00532 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms