Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 AC026523.2-201ENST00000625039 7739 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CDK3Q00526 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDK3Q00526 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK3Q00526 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK3Q00526 RNA5SP453-201ENST00000362503 119 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 SNORA58B-201ENST00000364259 136 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK3Q00526 MIR589-201ENST00000385238 99 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 MIR1182-201ENST00000408363 97 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK3Q00526 AC009506.2-201ENST00000420635 840 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 AC007394.1-201ENST00000421941 531 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.16□□□□□ -1.58
CDK3Q00526 MTND4LP13-201ENST00000425022 298 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 AL161722.2-201ENST00000434731 981 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 GAPDHP58-201ENST00000438477 1006 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 AC007000.2-201ENST00000442564 487 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 AC016772.1-201ENST00000444170 1261 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK3Q00526 NOP56P2-201ENST00000447491 769 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 AC092647.2-201ENST00000452998 253 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK3Q00526 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK3Q00526 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK3Q00526 AC090114.3-201ENST00000479267 829 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 AC004453.1-201ENST00000487895 408 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK3Q00526 RPS12P31-201ENST00000491419 398 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK3Q00526 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK3Q00526 AC034244.2-201ENST00000514668 858 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK3Q00526 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK3Q00526 AP003049.1-201ENST00000529418 457 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 AP002373.2-201ENST00000541631 1060 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK3Q00526 AC092490.3-201ENST00000545370 572 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDK3Q00526 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK3Q00526 AC027176.2-201ENST00000559166 746 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 RN7SL708P-201ENST00000580952 299 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 AC242628.1-201ENST00000606810 391 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 AL158211.2-201ENST00000607282 395 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 AC019131.2-201ENST00000609071 870 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 BX323046.1-201ENST00000610145 535 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 AC004241.3-201ENST00000611728 517 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 AC068870.2-201ENST00000620635 389 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 AP003400.6-201ENST00000624698 740 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CDK3Q00526 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDK3Q00526 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK3Q00526 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDK3Q00526 AL355834.1-201ENST00000556602 3965 ntBASIC5.16□□□□□ -1.58
CDK3Q00526 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CDK3Q00526 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK3Q00526 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDK3Q00526 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDK3Q00526 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDK3Q00526 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
CDK3Q00526 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDK3Q00526 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDK3Q00526 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.15□□□□□ -1.58
CDK3Q00526 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDK3Q00526 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDK3Q00526 PROS2P-201ENST00000474651 1951 ntBASIC5.15□□□□□ -1.58
CDK3Q00526 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDK3Q00526 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
CDK3Q00526 AC023421.1-201ENST00000590535 1785 ntBASIC5.15□□□□□ -1.58
CDK3Q00526 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CDK3Q00526 MIR133A2-201ENST00000347538 102 ntBASIC5.15□□□□□ -1.59
CDK3Q00526 RNA5SP305-201ENST00000362665 119 ntBASIC5.15□□□□□ -1.59
CDK3Q00526 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.15□□□□□ -1.59
CDK3Q00526 AL034403.1-201ENST00000399414 885 ntBASIC5.15□□□□□ -1.59
CDK3Q00526 Z86062.1-201ENST00000406773 777 ntBASIC5.15□□□□□ -1.59
CDK3Q00526 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.15□□□□□ -1.59
CDK3Q00526 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.15□□□□□ -1.59
CDK3Q00526 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CDK3Q00526 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.15□□□□□ -1.59
CDK3Q00526 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.15□□□□□ -1.59
CDK3Q00526 AC006065.1-201ENST00000422539 802 ntBASIC5.15□□□□□ -1.59
CDK3Q00526 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.15□□□□□ -1.59
CDK3Q00526 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.15□□□□□ -1.59
CDK3Q00526 RPL7AP49-201ENST00000429522 581 ntBASIC5.15□□□□□ -1.59
CDK3Q00526 AL591438.1-201ENST00000433508 581 ntBASIC5.15□□□□□ -1.59
CDK3Q00526 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDK3Q00526 MTCYBP29-201ENST00000436327 1006 ntBASIC5.15□□□□□ -1.59
CDK3Q00526 AL353898.1-201ENST00000444055 238 ntBASIC5.15□□□□□ -1.59
CDK3Q00526 CEACAMP7-201ENST00000444105 496 ntBASIC5.15□□□□□ -1.59
CDK3Q00526 MED28P3-201ENST00000444288 531 ntBASIC5.15□□□□□ -1.59
CDK3Q00526 AC073850.1-201ENST00000449243 255 ntBASIC5.15□□□□□ -1.59
CDK3Q00526 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.15□□□□□ -1.59
CDK3Q00526 RPL5P13-201ENST00000462840 709 ntBASIC5.15□□□□□ -1.59
CDK3Q00526 RN7SL329P-201ENST00000467740 299 ntBASIC5.15□□□□□ -1.59
CDK3Q00526 RN7SL189P-201ENST00000468631 289 ntBASIC5.15□□□□□ -1.59
CDK3Q00526 RN7SKP66-201ENST00000516681 231 ntBASIC5.15□□□□□ -1.59
CDK3Q00526 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.15□□□□□ -1.59
CDK3Q00526 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.15□□□□□ -1.59
CDK3Q00526 NOP56P3-201ENST00000549457 385 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms