Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.49□□□□□ -1.53
TPM4P67936 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.49□□□□□ -1.53
TPM4P67936 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TPM4P67936 AL136038.1-201ENST00000497246 351 ntBASIC5.49□□□□□ -1.53
TPM4P67936 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.49□□□□□ -1.53
TPM4P67936 AC021146.3-201ENST00000511911 260 ntBASIC5.49□□□□□ -1.53
TPM4P67936 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.49□□□□□ -1.53
TPM4P67936 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.49□□□□□ -1.53
TPM4P67936 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.49□□□□□ -1.53
TPM4P67936 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.49□□□□□ -1.53
TPM4P67936 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.49□□□□□ -1.53
TPM4P67936 AL121890.2-201ENST00000617644 465 ntBASIC5.49□□□□□ -1.53
TPM4P67936 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.49□□□□□ -1.53
TPM4P67936 KARSP1-201ENST00000451871 1752 ntBASIC5.49□□□□□ -1.53
TPM4P67936 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TPM4P67936 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TPM4P67936 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TPM4P67936 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TPM4P67936 OR51H2P-202ENST00000641424 3046 ntBASIC5.48□□□□□ -1.53
TPM4P67936 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TPM4P67936 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TPM4P67936 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TPM4P67936 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.48□□□□□ -1.53
TPM4P67936 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TPM4P67936 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TPM4P67936 AL021331.1-201ENST00000402817 582 ntBASIC5.48□□□□□ -1.53
TPM4P67936 U3.35-201ENST00000408405 208 ntBASIC5.48□□□□□ -1.53
TPM4P67936 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.48□□□□□ -1.53
TPM4P67936 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TPM4P67936 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.48□□□□□ -1.53
TPM4P67936 RPS27P18-201ENST00000431701 247 ntBASIC5.48□□□□□ -1.53
TPM4P67936 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.48□□□□□ -1.53
TPM4P67936 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.48□□□□□ -1.53
TPM4P67936 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.48□□□□□ -1.53
TPM4P67936 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.48□□□□□ -1.53
TPM4P67936 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.48□□□□□ -1.53
TPM4P67936 OR52E7P-201ENST00000452394 933 ntBASIC5.48□□□□□ -1.53
TPM4P67936 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.48□□□□□ -1.53
TPM4P67936 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.48□□□□□ -1.53
TPM4P67936 AC094085.1-201ENST00000468914 584 ntBASIC5.48□□□□□ -1.53
TPM4P67936 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.48□□□□□ -1.53
TPM4P67936 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
TPM4P67936 RN7SL547P-201ENST00000490793 290 ntBASIC5.48□□□□□ -1.53
TPM4P67936 EIF4E2P2-201ENST00000492033 736 ntBASIC5.48□□□□□ -1.53
TPM4P67936 RPL37P23-201ENST00000492641 294 ntBASIC5.48□□□□□ -1.53
TPM4P67936 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.48□□□□□ -1.53
TPM4P67936 AC112184.1-201ENST00000505179 312 ntBASIC5.48□□□□□ -1.53
TPM4P67936 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.48□□□□□ -1.53
TPM4P67936 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.48□□□□□ -1.53
TPM4P67936 RN7SKP260-201ENST00000516907 149 ntBASIC5.48□□□□□ -1.53
TPM4P67936 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.48□□□□□ -1.53
TPM4P67936 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.48□□□□□ -1.53
TPM4P67936 AC087477.6-201ENST00000559595 843 ntBASIC5.48□□□□□ -1.53
TPM4P67936 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.48□□□□□ -1.53
TPM4P67936 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.48□□□□□ -1.53
TPM4P67936 AC009779.8-202ENST00000607990 932 ntBASIC5.48□□□□□ -1.53
TPM4P67936 AC005840.5-201ENST00000619166 599 ntBASIC5.48□□□□□ -1.53
TPM4P67936 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TPM4P67936 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TPM4P67936 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TPM4P67936 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TPM4P67936 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.47□□□□□ -1.53
TPM4P67936 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
TPM4P67936 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.47□□□□□ -1.53
TPM4P67936 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.47□□□□□ -1.53
TPM4P67936 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TPM4P67936 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
TPM4P67936 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TPM4P67936 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TPM4P67936 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.47□□□□□ -1.53
TPM4P67936 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TPM4P67936 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TPM4P67936 RNU1-83P-201ENST00000363426 164 ntBASIC5.47□□□□□ -1.53
TPM4P67936 AC009804.1-201ENST00000400949 179 ntBASIC5.47□□□□□ -1.53
TPM4P67936 VN1R12P-201ENST00000403778 876 ntBASIC5.47□□□□□ -1.53
TPM4P67936 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.47□□□□□ -1.53
TPM4P67936 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.47□□□□□ -1.53
TPM4P67936 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.47□□□□□ -1.53
TPM4P67936 ARL4AP3-201ENST00000441452 574 ntBASIC5.47□□□□□ -1.53
TPM4P67936 Z80107.2-201ENST00000445127 392 ntBASIC5.47□□□□□ -1.53
TPM4P67936 HMGN1P36-201ENST00000446623 298 ntBASIC5.47□□□□□ -1.53
TPM4P67936 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.47□□□□□ -1.53
TPM4P67936 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.47□□□□□ -1.53
TPM4P67936 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.47□□□□□ -1.53
TPM4P67936 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.47□□□□□ -1.53
TPM4P67936 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.47□□□□□ -1.53
TPM4P67936 AC022404.1-201ENST00000555320 273 ntBASIC5.47□□□□□ -1.53
TPM4P67936 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.47□□□□□ -1.53
TPM4P67936 SNORA74C-1-201ENST00000580726 201 ntBASIC5.47□□□□□ -1.53
TPM4P67936 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.47□□□□□ -1.53
TPM4P67936 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.47□□□□□ -1.53
TPM4P67936 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.47□□□□□ -1.53
TPM4P67936 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.47□□□□□ -1.53
TPM4P67936 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TPM4P67936 uc_338.18-201ENST00000615451 175 ntBASIC5.47□□□□□ -1.53
TPM4P67936 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.47□□□□□ -1.53
TPM4P67936 AC090527.3-201ENST00000619041 548 ntBASIC5.47□□□□□ -1.53
TPM4P67936 AC048341.3-201ENST00000619323 491 ntBASIC5.47□□□□□ -1.53
TPM4P67936 AC243960.7-201ENST00000623532 707 ntBASIC5.47□□□□□ -1.53
TPM4P67936 AC079298.2-201ENST00000623885 459 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms