Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC124944.2-201ENST00000429866 1242 ntBASIC4.41□□□□□ -1.7
UBA52P62987 AL035090.1-201ENST00000454835 332 ntBASIC4.41□□□□□ -1.7
UBA52P62987 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
UBA52P62987 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.41□□□□□ -1.7
UBA52P62987 RPL21P6-201ENST00000479171 504 ntBASIC4.41□□□□□ -1.7
UBA52P62987 AC093827.1-201ENST00000480094 861 ntBASIC4.41□□□□□ -1.7
UBA52P62987 AC090686.1-201ENST00000481577 749 ntBASIC4.41□□□□□ -1.7
UBA52P62987 SNRPCP2-201ENST00000504370 475 ntBASIC4.41□□□□□ -1.7
UBA52P62987 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.41□□□□□ -1.7
UBA52P62987 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.41□□□□□ -1.7
UBA52P62987 AL671862.1-201ENST00000515851 349 ntBASIC4.41□□□□□ -1.7
UBA52P62987 HIGD1AP5-201ENST00000529959 259 ntBASIC4.41□□□□□ -1.7
UBA52P62987 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.41□□□□□ -1.7
UBA52P62987 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.41□□□□□ -1.7
UBA52P62987 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.41□□□□□ -1.7
UBA52P62987 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.41□□□□□ -1.7
UBA52P62987 OR1F2P-201ENST00000570470 933 ntBASIC4.41□□□□□ -1.7
UBA52P62987 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.41□□□□□ -1.7
UBA52P62987 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
UBA52P62987 AC006116.3-201ENST00000592968 361 ntBASIC4.41□□□□□ -1.7
UBA52P62987 AC104785.1-201ENST00000603220 588 ntBASIC4.41□□□□□ -1.7
UBA52P62987 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.41□□□□□ -1.7
UBA52P62987 AC100827.5-201ENST00000615883 426 ntBASIC4.41□□□□□ -1.7
UBA52P62987 AP002799.1-201ENST00000623552 423 ntBASIC4.41□□□□□ -1.7
UBA52P62987 AC074101.1-201ENST00000637861 241 ntBASIC4.41□□□□□ -1.7
UBA52P62987 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UBA52P62987 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.41□□□□□ -1.7
UBA52P62987 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UBA52P62987 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
UBA52P62987 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
UBA52P62987 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
UBA52P62987 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
UBA52P62987 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
UBA52P62987 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
UBA52P62987 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
UBA52P62987 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
UBA52P62987 CASC19-221ENST00000641309 1382 ntBASIC4.4□□□□□ -1.7
UBA52P62987 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
UBA52P62987 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
UBA52P62987 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
UBA52P62987 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
UBA52P62987 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.7
UBA52P62987 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.4□□□□□ -1.7
UBA52P62987 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
UBA52P62987 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
UBA52P62987 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
UBA52P62987 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
UBA52P62987 AL009179.1-201ENST00000406085 265 ntBASIC4.4□□□□□ -1.71
UBA52P62987 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.4□□□□□ -1.71
UBA52P62987 RPA2P2-201ENST00000419698 796 ntBASIC4.4□□□□□ -1.71
UBA52P62987 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.4□□□□□ -1.71
UBA52P62987 RPS26P4-201ENST00000431743 355 ntBASIC4.4□□□□□ -1.71
UBA52P62987 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.4□□□□□ -1.71
UBA52P62987 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.4□□□□□ -1.71
UBA52P62987 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.4□□□□□ -1.71
UBA52P62987 RPS11P7-201ENST00000442125 465 ntBASIC4.4□□□□□ -1.71
UBA52P62987 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.4□□□□□ -1.71
UBA52P62987 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
UBA52P62987 RPL5P16-201ENST00000471467 790 ntBASIC4.4□□□□□ -1.71
UBA52P62987 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.4□□□□□ -1.71
UBA52P62987 SUMO2P4-201ENST00000504193 276 ntBASIC4.4□□□□□ -1.71
UBA52P62987 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.4□□□□□ -1.71
UBA52P62987 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.4□□□□□ -1.71
UBA52P62987 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.4□□□□□ -1.71
UBA52P62987 OR11J2P-201ENST00000555298 907 ntBASIC4.4□□□□□ -1.71
UBA52P62987 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.4□□□□□ -1.71
UBA52P62987 RBM22P1-201ENST00000578589 1214 ntBASIC4.4□□□□□ -1.71
UBA52P62987 RNF138P2-201ENST00000603490 592 ntBASIC4.4□□□□□ -1.71
UBA52P62987 AC018695.5-201ENST00000605872 315 ntBASIC4.4□□□□□ -1.71
UBA52P62987 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
UBA52P62987 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
UBA52P62987 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.4□□□□□ -1.71
UBA52P62987 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
UBA52P62987 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
UBA52P62987 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
UBA52P62987 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.4□□□□□ -1.71
UBA52P62987 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.39□□□□□ -1.71
UBA52P62987 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UBA52P62987 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UBA52P62987 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
UBA52P62987 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.39□□□□□ -1.71
UBA52P62987 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
UBA52P62987 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.39□□□□□ -1.71
UBA52P62987 AC107068.1-201ENST00000563286 4218 ntBASIC4.39□□□□□ -1.71
UBA52P62987 RNU4-44P-201ENST00000363050 141 ntBASIC4.39□□□□□ -1.71
UBA52P62987 RNU1-149P-201ENST00000390870 161 ntBASIC4.39□□□□□ -1.71
UBA52P62987 DUTP5-201ENST00000406790 469 ntBASIC4.39□□□□□ -1.71
UBA52P62987 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.39□□□□□ -1.71
UBA52P62987 CYCSP10-201ENST00000417973 294 ntBASIC4.39□□□□□ -1.71
UBA52P62987 AC013429.2-201ENST00000418798 781 ntBASIC4.39□□□□□ -1.71
UBA52P62987 AC093162.1-201ENST00000419682 124 ntBASIC4.39□□□□□ -1.71
UBA52P62987 PRUNEP1-201ENST00000425846 705 ntBASIC4.39□□□□□ -1.71
UBA52P62987 FABP7P2-201ENST00000429946 379 ntBASIC4.39□□□□□ -1.71
UBA52P62987 PSMD10P3-201ENST00000437000 448 ntBASIC4.39□□□□□ -1.71
UBA52P62987 AC006466.1-201ENST00000438721 289 ntBASIC4.39□□□□□ -1.71
UBA52P62987 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UBA52P62987 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.39□□□□□ -1.71
UBA52P62987 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.39□□□□□ -1.71
UBA52P62987 RN7SL860P-201ENST00000473738 223 ntBASIC4.39□□□□□ -1.71
UBA52P62987 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms