Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 RNA5SP303-201ENST00000516192 130 ntBASIC4.21□□□□□ -1.74
SPCS3P61009 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.21□□□□□ -1.74
SPCS3P61009 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.21□□□□□ -1.74
SPCS3P61009 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SPCS3P61009 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.21□□□□□ -1.74
SPCS3P61009 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.21□□□□□ -1.74
SPCS3P61009 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC4.21□□□□□ -1.74
SPCS3P61009 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.21□□□□□ -1.74
SPCS3P61009 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.21□□□□□ -1.74
SPCS3P61009 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.21□□□□□ -1.74
SPCS3P61009 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SPCS3P61009 AC067773.1-201ENST00000603284 1094 ntBASIC4.21□□□□□ -1.74
SPCS3P61009 AC010809.3-201ENST00000621310 641 ntBASIC4.21□□□□□ -1.74
SPCS3P61009 AC129915.3-201ENST00000634128 948 ntBASIC4.21□□□□□ -1.74
SPCS3P61009 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SPCS3P61009 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.21□□□□□ -1.74
SPCS3P61009 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SPCS3P61009 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SPCS3P61009 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
SPCS3P61009 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.21□□□□□ -1.74
SPCS3P61009 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SPCS3P61009 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.21□□□□□ -1.74
SPCS3P61009 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SPCS3P61009 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SPCS3P61009 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.21□□□□□ -1.74
SPCS3P61009 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SPCS3P61009 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SPCS3P61009 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SPCS3P61009 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.2□□□□□ -1.74
SPCS3P61009 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SPCS3P61009 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.2□□□□□ -1.74
SPCS3P61009 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SPCS3P61009 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SPCS3P61009 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SPCS3P61009 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SPCS3P61009 AC017104.4-201ENST00000636283 1592 ntBASIC4.2□□□□□ -1.74
SPCS3P61009 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.2□□□□□ -1.74
SPCS3P61009 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SPCS3P61009 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.2□□□□□ -1.74
SPCS3P61009 RNA5SP46-201ENST00000362370 120 ntBASIC4.2□□□□□ -1.74
SPCS3P61009 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SPCS3P61009 AL390316.1-201ENST00000406279 553 ntBASIC4.2□□□□□ -1.74
SPCS3P61009 RNU2-50P-201ENST00000410494 143 ntBASIC4.2□□□□□ -1.74
SPCS3P61009 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SPCS3P61009 EEF1B2P8-201ENST00000414101 671 ntBASIC4.2□□□□□ -1.74
SPCS3P61009 AC093155.2-201ENST00000420734 937 ntBASIC4.2□□□□□ -1.74
SPCS3P61009 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.2□□□□□ -1.74
SPCS3P61009 RPS26P47-201ENST00000427219 348 ntBASIC4.2□□□□□ -1.74
SPCS3P61009 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.2□□□□□ -1.74
SPCS3P61009 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.2□□□□□ -1.74
SPCS3P61009 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.2□□□□□ -1.74
SPCS3P61009 FMO7P-201ENST00000436045 768 ntBASIC4.2□□□□□ -1.74
SPCS3P61009 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.2□□□□□ -1.74
SPCS3P61009 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.2□□□□□ -1.74
SPCS3P61009 EEF1B2P6-201ENST00000445713 673 ntBASIC4.2□□□□□ -1.74
SPCS3P61009 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SPCS3P61009 AC243772.1-201ENST00000451620 410 ntBASIC4.2□□□□□ -1.74
SPCS3P61009 RPL23AP2-201ENST00000471227 466 ntBASIC4.2□□□□□ -1.74
SPCS3P61009 DEFB109D-201ENST00000529497 240 ntBASIC4.2□□□□□ -1.74
SPCS3P61009 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.2□□□□□ -1.74
SPCS3P61009 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.2□□□□□ -1.74
SPCS3P61009 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SPCS3P61009 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.2□□□□□ -1.74
SPCS3P61009 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.2□□□□□ -1.74
SPCS3P61009 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.2□□□□□ -1.74
SPCS3P61009 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SPCS3P61009 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SPCS3P61009 AC079315.1-201ENST00000602952 623 ntBASIC4.2□□□□□ -1.74
SPCS3P61009 AC067838.1-201ENST00000606064 577 ntBASIC4.2□□□□□ -1.74
SPCS3P61009 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.2□□□□□ -1.74
SPCS3P61009 MTCO1P1-201ENST00000624263 1081 ntBASIC4.2□□□□□ -1.74
SPCS3P61009 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.2□□□□□ -1.74
SPCS3P61009 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.2□□□□□ -1.74
SPCS3P61009 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.2□□□□□ -1.74
SPCS3P61009 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.2□□□□□ -1.74
SPCS3P61009 AC093311.1-201ENST00000506586 2021 ntBASIC4.2□□□□□ -1.74
SPCS3P61009 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SPCS3P61009 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
SPCS3P61009 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.2□□□□□ -1.74
SPCS3P61009 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SPCS3P61009 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
SPCS3P61009 AL121950.1-201ENST00000624993 2077 ntBASIC4.2□□□□□ -1.74
SPCS3P61009 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SPCS3P61009 SCARNA15-201ENST00000607520 4325 ntBASIC4.19□□□□□ -1.74
SPCS3P61009 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SPCS3P61009 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SPCS3P61009 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SPCS3P61009 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SPCS3P61009 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SPCS3P61009 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SPCS3P61009 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SPCS3P61009 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SPCS3P61009 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SPCS3P61009 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SPCS3P61009 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SPCS3P61009 AC023490.2-201ENST00000359859 470 ntBASIC4.19□□□□□ -1.74
SPCS3P61009 RN7SKP104-201ENST00000362605 328 ntBASIC4.19□□□□□ -1.74
SPCS3P61009 AL133388.1-201ENST00000404509 287 ntBASIC4.19□□□□□ -1.74
SPCS3P61009 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SPCS3P61009 AL035079.1-201ENST00000405210 287 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms