Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 SNORA77-201ENST00000408716 125 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 RN7SKP114-201ENST00000410327 279 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 RN7SKP97-201ENST00000410966 333 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.88□□□□□ -1.63
PKNOX1P55347 TMBIM7P-201ENST00000418074 855 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 AC012519.1-201ENST00000424588 610 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.88□□□□□ -1.63
PKNOX1P55347 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.88□□□□□ -1.63
PKNOX1P55347 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.88□□□□□ -1.63
PKNOX1P55347 SNRPFP2-201ENST00000440710 251 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 PCNPP2-201ENST00000441651 455 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.88□□□□□ -1.63
PKNOX1P55347 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.88□□□□□ -1.63
PKNOX1P55347 AL354714.3-201ENST00000447284 493 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.88□□□□□ -1.63
PKNOX1P55347 AL691482.1-201ENST00000453255 87 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 HMGB1P4-201ENST00000455362 567 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.88□□□□□ -1.63
PKNOX1P55347 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PKNOX1P55347 MTCO3P42-201ENST00000509488 518 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 BTG4P1-201ENST00000510421 183 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 MTCO3P39-201ENST00000514812 518 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 BX510359.5-201ENST00000515651 304 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.88□□□□□ -1.63
PKNOX1P55347 OR4A46P-201ENST00000527255 933 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.88□□□□□ -1.63
PKNOX1P55347 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PKNOX1P55347 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.88□□□□□ -1.63
PKNOX1P55347 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.88□□□□□ -1.63
PKNOX1P55347 SNORD95-201ENST00000579879 68 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.88□□□□□ -1.63
PKNOX1P55347 AC010615.3-201ENST00000597319 394 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 QTRT1P1-201ENST00000604344 1078 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 MIR6861-201ENST00000618657 64 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.88□□□□□ -1.63
PKNOX1P55347 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.88□□□□□ -1.63
PKNOX1P55347 CASC19-264ENST00000641912 1184 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PKNOX1P55347 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PKNOX1P55347 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.88□□□□□ -1.63
PKNOX1P55347 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PKNOX1P55347 AL672167.1-203ENST00000641299 2975 ntBASIC4.88□□□□□ -1.63
PKNOX1P55347 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
PKNOX1P55347 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PKNOX1P55347 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
PKNOX1P55347 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PKNOX1P55347 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
PKNOX1P55347 AC011493.1-201ENST00000596753 1632 ntBASIC4.87□□□□□ -1.63
PKNOX1P55347 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
PKNOX1P55347 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PKNOX1P55347 MTND5P23-201ENST00000430812 1655 ntBASIC4.87□□□□□ -1.63
PKNOX1P55347 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PKNOX1P55347 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PKNOX1P55347 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.87□□□□□ -1.63
PKNOX1P55347 ATP5HP3-201ENST00000396994 486 ntBASIC4.87□□□□□ -1.63
PKNOX1P55347 OR13Z1P-201ENST00000416141 834 ntBASIC4.87□□□□□ -1.63
PKNOX1P55347 AL513325.1-201ENST00000417716 1034 ntBASIC4.87□□□□□ -1.63
PKNOX1P55347 QRSL1P2-201ENST00000418582 964 ntBASIC4.87□□□□□ -1.63
PKNOX1P55347 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PKNOX1P55347 BX323845.1-201ENST00000432417 179 ntBASIC4.87□□□□□ -1.63
PKNOX1P55347 AL138899.2-201ENST00000439139 499 ntBASIC4.87□□□□□ -1.63
PKNOX1P55347 AL589765.3-201ENST00000446084 462 ntBASIC4.87□□□□□ -1.63
PKNOX1P55347 RPS17P2-201ENST00000461663 408 ntBASIC4.87□□□□□ -1.63
PKNOX1P55347 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.87□□□□□ -1.63
PKNOX1P55347 AC009127.1-201ENST00000467090 155 ntBASIC4.87□□□□□ -1.63
PKNOX1P55347 AC112206.1-201ENST00000468416 477 ntBASIC4.87□□□□□ -1.63
PKNOX1P55347 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.87□□□□□ -1.63
PKNOX1P55347 AL136038.1-201ENST00000497246 351 ntBASIC4.87□□□□□ -1.63
PKNOX1P55347 AC113398.2-201ENST00000507630 558 ntBASIC4.87□□□□□ -1.63
PKNOX1P55347 RNA5SP464-201ENST00000516251 108 ntBASIC4.87□□□□□ -1.63
PKNOX1P55347 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.87□□□□□ -1.63
PKNOX1P55347 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.87□□□□□ -1.63
PKNOX1P55347 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.87□□□□□ -1.63
PKNOX1P55347 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.87□□□□□ -1.63
PKNOX1P55347 CYCSP40-201ENST00000575927 294 ntBASIC4.87□□□□□ -1.63
PKNOX1P55347 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.87□□□□□ -1.63
PKNOX1P55347 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.87□□□□□ -1.63
PKNOX1P55347 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.87□□□□□ -1.63
PKNOX1P55347 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.87□□□□□ -1.63
PKNOX1P55347 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PKNOX1P55347 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PKNOX1P55347 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PKNOX1P55347 MAPK10-349ENST00000641767 3661 ntBASIC4.87□□□□□ -1.63
PKNOX1P55347 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PKNOX1P55347 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
PKNOX1P55347 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PKNOX1P55347 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PKNOX1P55347 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PKNOX1P55347 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.86□□□□□ -1.63
PKNOX1P55347 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.86□□□□□ -1.63
PKNOX1P55347 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PKNOX1P55347 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PKNOX1P55347 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PKNOX1P55347 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.86□□□□□ -1.63
PKNOX1P55347 LINC01355-201ENST00000566551 5444 ntBASIC4.86□□□□□ -1.63
PKNOX1P55347 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PKNOX1P55347 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PKNOX1P55347 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PKNOX1P55347 OR3A2-201ENST00000408891 1076 ntBASIC4.86□□□□□ -1.63
PKNOX1P55347 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms