Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH11P55287 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CDH11P55287 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CDH11P55287 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CDH11P55287 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CDH11P55287 CR788268.1-201ENST00000603931 1809 ntBASIC4.9□□□□□ -1.62
CDH11P55287 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDH11P55287 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CDH11P55287 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.9□□□□□ -1.62
CDH11P55287 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDH11P55287 AL450345.1-202ENST00000605741 3881 ntBASIC4.9□□□□□ -1.62
CDH11P55287 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDH11P55287 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CDH11P55287 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CDH11P55287 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDH11P55287 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDH11P55287 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH11P55287 AL391422.1-201ENST00000402155 436 ntBASIC4.9□□□□□ -1.63
CDH11P55287 RPL12P9-201ENST00000412942 488 ntBASIC4.9□□□□□ -1.63
CDH11P55287 COX5BP7-201ENST00000414780 274 ntBASIC4.9□□□□□ -1.63
CDH11P55287 AL133173.1-201ENST00000423458 397 ntBASIC4.9□□□□□ -1.63
CDH11P55287 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH11P55287 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH11P55287 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH11P55287 SNRPFP2-201ENST00000440710 251 ntBASIC4.9□□□□□ -1.63
CDH11P55287 SPRYD7P1-201ENST00000443861 570 ntBASIC4.9□□□□□ -1.63
CDH11P55287 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH11P55287 AC245028.2-201ENST00000458673 253 ntBASIC4.9□□□□□ -1.63
CDH11P55287 AC078857.1-201ENST00000469870 667 ntBASIC4.9□□□□□ -1.63
CDH11P55287 AC100832.1-201ENST00000471945 383 ntBASIC4.9□□□□□ -1.63
CDH11P55287 RN7SL184P-201ENST00000488308 297 ntBASIC4.9□□□□□ -1.63
CDH11P55287 RPS12P31-201ENST00000491419 398 ntBASIC4.9□□□□□ -1.63
CDH11P55287 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.9□□□□□ -1.63
CDH11P55287 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH11P55287 AC010468.3-201ENST00000508225 458 ntBASIC4.9□□□□□ -1.63
CDH11P55287 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH11P55287 NRBF2P4-201ENST00000520874 850 ntBASIC4.9□□□□□ -1.63
CDH11P55287 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH11P55287 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH11P55287 AP003102.1-201ENST00000525638 661 ntBASIC4.9□□□□□ -1.63
CDH11P55287 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.9□□□□□ -1.63
CDH11P55287 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH11P55287 AC040958.1-201ENST00000561102 201 ntBASIC4.9□□□□□ -1.63
CDH11P55287 AP005262.1-201ENST00000582646 997 ntBASIC4.9□□□□□ -1.63
CDH11P55287 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH11P55287 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH11P55287 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
CDH11P55287 DNAJC19P3-201ENST00000594491 331 ntBASIC4.9□□□□□ -1.63
CDH11P55287 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH11P55287 SUMO2P15-201ENST00000604285 278 ntBASIC4.9□□□□□ -1.63
CDH11P55287 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH11P55287 AC005021.1-201ENST00000608730 355 ntBASIC4.9□□□□□ -1.63
CDH11P55287 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH11P55287 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH11P55287 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDH11P55287 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH11P55287 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CDH11P55287 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH11P55287 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CDH11P55287 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH11P55287 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH11P55287 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDH11P55287 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH11P55287 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH11P55287 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH11P55287 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
CDH11P55287 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CDH11P55287 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CDH11P55287 AL592494.2-201ENST00000425455 1548 ntBASIC4.89□□□□□ -1.63
CDH11P55287 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH11P55287 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH11P55287 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH11P55287 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH11P55287 RNA5SP319-201ENST00000362768 119 ntBASIC4.89□□□□□ -1.63
CDH11P55287 RNU6-249P-201ENST00000363016 102 ntBASIC4.89□□□□□ -1.63
CDH11P55287 RN7SKP162-201ENST00000363605 345 ntBASIC4.89□□□□□ -1.63
CDH11P55287 RNA5SP131-201ENST00000365452 119 ntBASIC4.89□□□□□ -1.63
CDH11P55287 GAPDHP42-201ENST00000406848 981 ntBASIC4.89□□□□□ -1.63
CDH11P55287 AP000534.2-201ENST00000412729 568 ntBASIC4.89□□□□□ -1.63
CDH11P55287 PCNPP4-201ENST00000414817 517 ntBASIC4.89□□□□□ -1.63
CDH11P55287 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH11P55287 GLUD1P9-201ENST00000420997 1173 ntBASIC4.89□□□□□ -1.63
CDH11P55287 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH11P55287 MTND2P9-201ENST00000422293 931 ntBASIC4.89□□□□□ -1.63
CDH11P55287 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH11P55287 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH11P55287 AC012075.1-201ENST00000436549 580 ntBASIC4.89□□□□□ -1.63
CDH11P55287 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CDH11P55287 ELOCP3-201ENST00000439303 348 ntBASIC4.89□□□□□ -1.63
CDH11P55287 AL390119.1-201ENST00000440329 312 ntBASIC4.89□□□□□ -1.63
CDH11P55287 SUMO2P1-206ENST00000445436 284 ntBASIC4.89□□□□□ -1.63
CDH11P55287 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CDH11P55287 MYO5BP2-201ENST00000449815 1277 ntBASIC4.89□□□□□ -1.63
CDH11P55287 SEPT7P3-201ENST00000455017 621 ntBASIC4.89□□□□□ -1.63
CDH11P55287 MTND2P6-201ENST00000455337 1030 ntBASIC4.89□□□□□ -1.63
CDH11P55287 LDHBP2-201ENST00000456969 1005 ntBASIC4.89□□□□□ -1.63
CDH11P55287 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH11P55287 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.89□□□□□ -1.63
CDH11P55287 RPS24P16-201ENST00000497294 392 ntBASIC4.89□□□□□ -1.63
CDH11P55287 HMGB1P3-201ENST00000502802 616 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms