Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH6P55285 THAP12P4-201ENST00000528321 2266 ntBASIC5.18□□□□□ -1.58
CDH6P55285 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH6P55285 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH6P55285 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
CDH6P55285 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH6P55285 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH6P55285 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH6P55285 RNA5SP455-201ENST00000365190 119 ntBASIC5.18□□□□□ -1.58
CDH6P55285 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH6P55285 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH6P55285 AC010740.1-201ENST00000417035 684 ntBASIC5.18□□□□□ -1.58
CDH6P55285 OR6C64P-201ENST00000419708 825 ntBASIC5.18□□□□□ -1.58
CDH6P55285 HSPE1P16-201ENST00000426640 348 ntBASIC5.18□□□□□ -1.58
CDH6P55285 NPM1P22-201ENST00000427761 952 ntBASIC5.18□□□□□ -1.58
CDH6P55285 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.18□□□□□ -1.58
CDH6P55285 AC073052.1-201ENST00000440417 714 ntBASIC5.18□□□□□ -1.58
CDH6P55285 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH6P55285 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH6P55285 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH6P55285 NDUFA5P8-201ENST00000449019 346 ntBASIC5.18□□□□□ -1.58
CDH6P55285 AC018638.3-201ENST00000461273 132 ntBASIC5.18□□□□□ -1.58
CDH6P55285 AP002371.1-201ENST00000463604 433 ntBASIC5.18□□□□□ -1.58
CDH6P55285 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH6P55285 RN7SL799P-201ENST00000475891 298 ntBASIC5.18□□□□□ -1.58
CDH6P55285 RN7SL727P-201ENST00000482164 296 ntBASIC5.18□□□□□ -1.58
CDH6P55285 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH6P55285 COX6B1P5-201ENST00000509843 249 ntBASIC5.18□□□□□ -1.58
CDH6P55285 SCARNA21.2-201ENST00000516600 166 ntBASIC5.18□□□□□ -1.58
CDH6P55285 RPL23AP53-201ENST00000521854 457 ntBASIC5.18□□□□□ -1.58
CDH6P55285 OR10D4P-201ENST00000525892 951 ntBASIC5.18□□□□□ -1.58
CDH6P55285 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH6P55285 OR7E128P-201ENST00000532736 1024 ntBASIC5.18□□□□□ -1.58
CDH6P55285 AC092490.3-201ENST00000545370 572 ntBASIC5.18□□□□□ -1.58
CDH6P55285 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH6P55285 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CDH6P55285 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH6P55285 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH6P55285 EIF1P5-201ENST00000585002 234 ntBASIC5.18□□□□□ -1.58
CDH6P55285 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH6P55285 AL713998.2-201ENST00000604538 1198 ntBASIC5.18□□□□□ -1.58
CDH6P55285 AC096586.2-201ENST00000610260 441 ntBASIC5.18□□□□□ -1.58
CDH6P55285 AL139407.1-201ENST00000613826 1175 ntBASIC5.18□□□□□ -1.58
CDH6P55285 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.18□□□□□ -1.58
CDH6P55285 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CDH6P55285 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH6P55285 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
CDH6P55285 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH6P55285 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH6P55285 AL731532.2-201ENST00000623542 1953 ntBASIC5.18□□□□□ -1.58
CDH6P55285 AC245100.2-201ENST00000454544 1679 ntBASIC5.18□□□□□ -1.58
CDH6P55285 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CDH6P55285 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
CDH6P55285 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH6P55285 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH6P55285 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH6P55285 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH6P55285 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH6P55285 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH6P55285 RARSP1-201ENST00000542842 1418 ntBASIC5.17□□□□□ -1.58
CDH6P55285 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH6P55285 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CDH6P55285 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH6P55285 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH6P55285 SETP15-201ENST00000412724 337 ntBASIC5.17□□□□□ -1.58
CDH6P55285 BX510359.3-201ENST00000422168 306 ntBASIC5.17□□□□□ -1.58
CDH6P55285 OR5M12P-201ENST00000423388 929 ntBASIC5.17□□□□□ -1.58
CDH6P55285 ARAFP2-201ENST00000440565 559 ntBASIC5.17□□□□□ -1.58
CDH6P55285 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH6P55285 GTF3AP5-201ENST00000442645 697 ntBASIC5.17□□□□□ -1.58
CDH6P55285 OR7E125P-201ENST00000443450 846 ntBASIC5.17□□□□□ -1.58
CDH6P55285 EEF1B2P5-201ENST00000444820 548 ntBASIC5.17□□□□□ -1.58
CDH6P55285 AL157385.1-201ENST00000446973 268 ntBASIC5.17□□□□□ -1.58
CDH6P55285 BTF3P6-201ENST00000448054 499 ntBASIC5.17□□□□□ -1.58
CDH6P55285 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH6P55285 AC005532.2-201ENST00000467154 373 ntBASIC5.17□□□□□ -1.58
CDH6P55285 AC090114.3-201ENST00000479267 829 ntBASIC5.17□□□□□ -1.58
CDH6P55285 TRBV8-1-201ENST00000481590 279 ntBASIC5.17□□□□□ -1.58
CDH6P55285 RN7SL244P-201ENST00000493405 297 ntBASIC5.17□□□□□ -1.58
CDH6P55285 USP9YP2-201ENST00000504503 1000 ntBASIC5.17□□□□□ -1.58
CDH6P55285 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH6P55285 USP9YP1-201ENST00000513521 1002 ntBASIC5.17□□□□□ -1.58
CDH6P55285 RNA5SP43-201ENST00000516559 110 ntBASIC5.17□□□□□ -1.58
CDH6P55285 OR10G5P-201ENST00000532733 358 ntBASIC5.17□□□□□ -1.58
CDH6P55285 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH6P55285 QTRT1P1-201ENST00000604344 1078 ntBASIC5.17□□□□□ -1.58
CDH6P55285 AC009163.6-201ENST00000612367 342 ntBASIC5.17□□□□□ -1.58
CDH6P55285 AL627230.1-201ENST00000613077 211 ntBASIC5.17□□□□□ -1.58
CDH6P55285 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH6P55285 AL591926.8-201ENST00000616876 211 ntBASIC5.17□□□□□ -1.58
CDH6P55285 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH6P55285 TMEM30CP-203ENST00000637814 1035 ntBASIC5.17□□□□□ -1.58
CDH6P55285 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH6P55285 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH6P55285 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CDH6P55285 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH6P55285 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH6P55285 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH6P55285 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH6P55285 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms