Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAD23BP54727 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAD23BP54727 OR11J2P-201ENST00000555298 907 ntBASIC5.56□□□□□ -1.52
RAD23BP54727 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAD23BP54727 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAD23BP54727 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.56□□□□□ -1.52
RAD23BP54727 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.56□□□□□ -1.52
RAD23BP54727 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.56□□□□□ -1.52
RAD23BP54727 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.56□□□□□ -1.52
RAD23BP54727 BNIP3P19-201ENST00000605397 577 ntBASIC5.56□□□□□ -1.52
RAD23BP54727 AL355802.4-201ENST00000607635 548 ntBASIC5.56□□□□□ -1.52
RAD23BP54727 AC126915.2-201ENST00000610957 190 ntBASIC5.56□□□□□ -1.52
RAD23BP54727 BNIP3P41-202ENST00000616656 861 ntBASIC5.56□□□□□ -1.52
RAD23BP54727 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RAD23BP54727 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.56□□□□□ -1.52
RAD23BP54727 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAD23BP54727 AC133552.1-201ENST00000569988 4007 ntBASIC5.56□□□□□ -1.52
RAD23BP54727 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
RAD23BP54727 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.55□□□□□ -1.52
RAD23BP54727 SMG1P4-204ENST00000523028 4131 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 AL512283.1-201ENST00000606756 1384 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
RAD23BP54727 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAD23BP54727 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAD23BP54727 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RAD23BP54727 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAD23BP54727 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAD23BP54727 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAD23BP54727 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAD23BP54727 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RAD23BP54727 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAD23BP54727 RNU1-74P-201ENST00000384108 171 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 NUDT19P3-201ENST00000404698 555 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 MIR1182-201ENST00000408363 97 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.55□□□□□ -1.52
RAD23BP54727 AP000534.2-201ENST00000412729 568 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.55□□□□□ -1.52
RAD23BP54727 AC013410.2-201ENST00000422627 201 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAD23BP54727 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.55□□□□□ -1.52
RAD23BP54727 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.55□□□□□ -1.52
RAD23BP54727 AL161722.1-201ENST00000446972 1032 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 RPL31P20-201ENST00000449593 360 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 FAR2P1-206ENST00000449736 709 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 AL353718.1-201ENST00000451028 517 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 OR52E3P-201ENST00000452083 936 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 MTND2P30-201ENST00000456663 382 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 RPS4XP12-201ENST00000461747 709 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 RN7SL222P-201ENST00000476452 299 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.55□□□□□ -1.52
RAD23BP54727 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.55□□□□□ -1.52
RAD23BP54727 AC016559.2-201ENST00000510759 359 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 GTF2F2P1-201ENST00000511083 675 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.55□□□□□ -1.52
RAD23BP54727 OR8A2P-201ENST00000528631 952 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.55□□□□□ -1.52
RAD23BP54727 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.55□□□□□ -1.52
RAD23BP54727 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.55□□□□□ -1.52
RAD23BP54727 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.55□□□□□ -1.52
RAD23BP54727 MTCYBP13-201ENST00000578634 1093 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 AC127024.5-201ENST00000580085 462 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 AC095055.1-201ENST00000603472 1113 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 HMGB1P51-201ENST00000605166 638 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 AP000894.4-201ENST00000610185 483 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.55□□□□□ -1.52
RAD23BP54727 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.55□□□□□ -1.52
RAD23BP54727 AC106858.1-201ENST00000637497 429 ntBASIC5.55□□□□□ -1.52
RAD23BP54727 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAD23BP54727 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.55□□□□□ -1.52
RAD23BP54727 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.55□□□□□ -1.52
RAD23BP54727 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAD23BP54727 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.55□□□□□ -1.52
RAD23BP54727 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAD23BP54727 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAD23BP54727 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.55□□□□□ -1.52
RAD23BP54727 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.55□□□□□ -1.52
RAD23BP54727 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAD23BP54727 AC104260.2-201ENST00000623551 3497 ntBASIC5.54□□□□□ -1.52
RAD23BP54727 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.54□□□□□ -1.52
RAD23BP54727 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAD23BP54727 MTCO1P7-201ENST00000419523 1542 ntBASIC5.54□□□□□ -1.52
RAD23BP54727 PANDAR-201ENST00000629595 1506 ntBASIC5.54□□□□□ -1.52
RAD23BP54727 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAD23BP54727 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAD23BP54727 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.54□□□□□ -1.52
RAD23BP54727 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAD23BP54727 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAD23BP54727 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAD23BP54727 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAD23BP54727 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAD23BP54727 MIR600-201ENST00000385007 98 ntBASIC5.54□□□□□ -1.52
RAD23BP54727 MIR223-201ENST00000385204 110 ntBASIC5.54□□□□□ -1.52
RAD23BP54727 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.54□□□□□ -1.52
RAD23BP54727 TRIM60P17-201ENST00000415181 719 ntBASIC5.54□□□□□ -1.52
RAD23BP54727 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.54□□□□□ -1.52
RAD23BP54727 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.54□□□□□ -1.52
RAD23BP54727 AL161722.2-201ENST00000434731 981 ntBASIC5.54□□□□□ -1.52
RAD23BP54727 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.54□□□□□ -1.52
RAD23BP54727 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms