Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.4□□□□□ -1.54
CHRNA3P32297 OR5M12P-201ENST00000423388 929 ntBASIC5.4□□□□□ -1.54
CHRNA3P32297 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA3P32297 AC005033.1-201ENST00000428904 813 ntBASIC5.4□□□□□ -1.54
CHRNA3P32297 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.4□□□□□ -1.54
CHRNA3P32297 SEPT14P1-201ENST00000458703 648 ntBASIC5.4□□□□□ -1.54
CHRNA3P32297 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.4□□□□□ -1.54
CHRNA3P32297 RPS18P6-201ENST00000476880 458 ntBASIC5.4□□□□□ -1.54
CHRNA3P32297 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.4□□□□□ -1.54
CHRNA3P32297 RNA5SP373-201ENST00000517271 95 ntBASIC5.4□□□□□ -1.54
CHRNA3P32297 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.4□□□□□ -1.54
CHRNA3P32297 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.4□□□□□ -1.54
CHRNA3P32297 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.4□□□□□ -1.54
CHRNA3P32297 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.4□□□□□ -1.54
CHRNA3P32297 BNIP3P1-201ENST00000547295 580 ntBASIC5.4□□□□□ -1.54
CHRNA3P32297 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.4□□□□□ -1.54
CHRNA3P32297 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.4□□□□□ -1.54
CHRNA3P32297 AL121612.2-201ENST00000612261 482 ntBASIC5.4□□□□□ -1.54
CHRNA3P32297 AC243960.7-201ENST00000623532 707 ntBASIC5.4□□□□□ -1.54
CHRNA3P32297 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CHRNA3P32297 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.4□□□□□ -1.55
CHRNA3P32297 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNA3P32297 AC063976.2-201ENST00000425667 3556 ntBASIC5.4□□□□□ -1.55
CHRNA3P32297 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNA3P32297 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNA3P32297 AL731566.1-201ENST00000620490 1937 ntBASIC5.4□□□□□ -1.55
CHRNA3P32297 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.4□□□□□ -1.55
CHRNA3P32297 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CHRNA3P32297 MRRFP1-201ENST00000435941 1675 ntBASIC5.4□□□□□ -1.55
CHRNA3P32297 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNA3P32297 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.4□□□□□ -1.55
CHRNA3P32297 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CHRNA3P32297 AL606537.1-201ENST00000607258 2011 ntBASIC5.4□□□□□ -1.55
CHRNA3P32297 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA3P32297 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.39□□□□□ -1.55
CHRNA3P32297 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA3P32297 RPL23P2-201ENST00000320371 421 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.39□□□□□ -1.55
CHRNA3P32297 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CHRNA3P32297 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA3P32297 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA3P32297 SNORA70-201ENST00000384436 135 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 MIR105-1-201ENST00000385222 81 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 DUTP5-201ENST00000406790 469 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 AC002524.1-201ENST00000411687 547 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.39□□□□□ -1.55
CHRNA3P32297 RCC2P2-201ENST00000422174 918 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.39□□□□□ -1.55
CHRNA3P32297 RPL7AP61-201ENST00000443410 636 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 FCF1P7-201ENST00000451185 558 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 AL389915.2-201ENST00000454576 441 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 AC005412.2-201ENST00000492004 341 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 AC073073.1-201ENST00000493920 463 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CHRNA3P32297 RPS4XP20-201ENST00000505751 772 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.39□□□□□ -1.55
CHRNA3P32297 RNU6-513P-201ENST00000516104 104 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 AC022832.1-201ENST00000530718 645 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.39□□□□□ -1.55
CHRNA3P32297 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.39□□□□□ -1.55
CHRNA3P32297 AC044860.2-201ENST00000561005 179 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 AL139407.1-201ENST00000613826 1175 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 AC090527.3-201ENST00000619041 548 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.39□□□□□ -1.55
CHRNA3P32297 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA3P32297 AL603750.1-201ENST00000624216 1717 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 HSPA8P14-201ENST00000552265 1805 ntBASIC5.39□□□□□ -1.55
CHRNA3P32297 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.39□□□□□ -1.55
CHRNA3P32297 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CHRNA3P32297 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA3P32297 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA3P32297 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CHRNA3P32297 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA3P32297 OR10AB1P-202ENST00000641219 1686 ntBASIC5.38□□□□□ -1.55
CHRNA3P32297 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA3P32297 STX3-208ENST00000641815 3236 ntBASIC5.38□□□□□ -1.55
CHRNA3P32297 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA3P32297 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA3P32297 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
CHRNA3P32297 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CHRNA3P32297 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CHRNA3P32297 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CHRNA3P32297 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
CHRNA3P32297 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.38□□□□□ -1.55
CHRNA3P32297 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.38□□□□□ -1.55
CHRNA3P32297 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.38□□□□□ -1.55
CHRNA3P32297 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.38□□□□□ -1.55
CHRNA3P32297 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.38□□□□□ -1.55
CHRNA3P32297 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.38□□□□□ -1.55
CHRNA3P32297 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.38□□□□□ -1.55
CHRNA3P32297 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.38□□□□□ -1.55
CHRNA3P32297 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.38□□□□□ -1.55
CHRNA3P32297 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.38□□□□□ -1.55
CHRNA3P32297 RAB28P3-201ENST00000448325 597 ntBASIC5.38□□□□□ -1.55
CHRNA3P32297 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.38□□□□□ -1.55
CHRNA3P32297 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA3P32297 AC097173.1-201ENST00000505862 819 ntBASIC5.38□□□□□ -1.55
CHRNA3P32297 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms