Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC7.72□□□□□ -1.17
CLIP1P30622 FAM27B-201ENST00000610601 213 ntBASIC7.72□□□□□ -1.17
CLIP1P30622 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC7.72□□□□□ -1.17
CLIP1P30622 FRG1EP-201ENST00000634469 770 ntBASIC7.72□□□□□ -1.17
CLIP1P30622 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CLIP1P30622 MAPK10-263ENST00000641052 4307 ntBASIC7.72□□□□□ -1.17
CLIP1P30622 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CLIP1P30622 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC7.72□□□□□ -1.17
CLIP1P30622 AP002512.4-202ENST00000641599 4530 ntBASIC7.72□□□□□ -1.17
CLIP1P30622 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CLIP1P30622 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
CLIP1P30622 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.72□□□□□ -1.17
CLIP1P30622 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CLIP1P30622 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.72□□□□□ -1.17
CLIP1P30622 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CLIP1P30622 AL450345.1-202ENST00000605741 3881 ntBASIC7.72□□□□□ -1.17
CLIP1P30622 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CLIP1P30622 AC068538.1-201ENST00000376856 336 ntBASIC7.71□□□□□ -1.17
CLIP1P30622 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
CLIP1P30622 CNOT7P1-201ENST00000429006 852 ntBASIC7.71□□□□□ -1.17
CLIP1P30622 RPS5P7-201ENST00000456664 608 ntBASIC7.71□□□□□ -1.17
CLIP1P30622 HPRT1P1-201ENST00000509498 657 ntBASIC7.71□□□□□ -1.17
CLIP1P30622 RPL23AP53-201ENST00000521854 457 ntBASIC7.71□□□□□ -1.17
CLIP1P30622 MIR6853-201ENST00000619642 74 ntBASIC7.71□□□□□ -1.17
CLIP1P30622 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
CLIP1P30622 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.71□□□□□ -1.17
CLIP1P30622 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
CLIP1P30622 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CLIP1P30622 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC7.71□□□□□ -1.18
CLIP1P30622 AL669831.5-218ENST00000591702 1873 ntBASIC7.71□□□□□ -1.18
CLIP1P30622 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CLIP1P30622 SOCS5P3-201ENST00000425115 1576 ntBASIC7.71□□□□□ -1.18
CLIP1P30622 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC7.71□□□□□ -1.18
CLIP1P30622 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
CLIP1P30622 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC7.7□□□□□ -1.18
CLIP1P30622 AL356967.1-201ENST00000406305 431 ntBASIC7.7□□□□□ -1.18
CLIP1P30622 AC009506.2-201ENST00000420635 840 ntBASIC7.7□□□□□ -1.18
CLIP1P30622 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC7.7□□□□□ -1.18
CLIP1P30622 AC068287.1-201ENST00000430283 295 ntBASIC7.7□□□□□ -1.18
CLIP1P30622 ATP6V0E1P2-201ENST00000441771 245 ntBASIC7.7□□□□□ -1.18
CLIP1P30622 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC7.7□□□□□ -1.18
CLIP1P30622 RN7SL558P-201ENST00000497468 299 ntBASIC7.7□□□□□ -1.18
CLIP1P30622 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC7.7□□□□□ -1.18
CLIP1P30622 AC091868.1-201ENST00000508746 304 ntBASIC7.7□□□□□ -1.18
CLIP1P30622 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC7.7□□□□□ -1.18
CLIP1P30622 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CLIP1P30622 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC7.7□□□□□ -1.18
CLIP1P30622 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CLIP1P30622 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CLIP1P30622 AC005831.1-201ENST00000624384 1697 ntBASIC7.7□□□□□ -1.18
CLIP1P30622 AL442639.1-201ENST00000625030 1899 ntBASIC7.7□□□□□ -1.18
CLIP1P30622 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLIP1P30622 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLIP1P30622 TLK1P1-201ENST00000456760 2440 ntBASIC7.7□□□□□ -1.18
CLIP1P30622 AC007382.1-201ENST00000624376 2618 ntBASIC7.7□□□□□ -1.18
CLIP1P30622 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CLIP1P30622 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC7.7□□□□□ -1.18
CLIP1P30622 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLIP1P30622 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLIP1P30622 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLIP1P30622 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CLIP1P30622 MIR298-201ENST00000401212 88 ntBASIC7.69□□□□□ -1.18
CLIP1P30622 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CLIP1P30622 PCNPP4-201ENST00000414817 517 ntBASIC7.69□□□□□ -1.18
CLIP1P30622 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC7.69□□□□□ -1.18
CLIP1P30622 AC108751.3-201ENST00000461814 1020 ntBASIC7.69□□□□□ -1.18
CLIP1P30622 AC073073.1-201ENST00000493920 463 ntBASIC7.69□□□□□ -1.18
CLIP1P30622 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC7.69□□□□□ -1.18
CLIP1P30622 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC7.69□□□□□ -1.18
CLIP1P30622 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC7.69□□□□□ -1.18
CLIP1P30622 AC093720.1-201ENST00000505681 714 ntBASIC7.69□□□□□ -1.18
CLIP1P30622 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.69□□□□□ -1.18
CLIP1P30622 AL049830.4-201ENST00000555149 351 ntBASIC7.69□□□□□ -1.18
CLIP1P30622 AP000919.1-201ENST00000582850 985 ntBASIC7.69□□□□□ -1.18
CLIP1P30622 AL031658.2-201ENST00000616850 651 ntBASIC7.69□□□□□ -1.18
CLIP1P30622 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC7.69□□□□□ -1.18
CLIP1P30622 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CLIP1P30622 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CLIP1P30622 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CLIP1P30622 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC7.69□□□□□ -1.18
CLIP1P30622 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CLIP1P30622 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CLIP1P30622 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
CLIP1P30622 CYCSP24-201ENST00000445119 316 ntBASIC7.69□□□□□ -1.18
CLIP1P30622 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC7.69□□□□□ -1.18
CLIP1P30622 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC7.69□□□□□ -1.18
CLIP1P30622 AC093815.1-201ENST00000508637 280 ntBASIC7.69□□□□□ -1.18
CLIP1P30622 RNU6-709P-201ENST00000517257 104 ntBASIC7.69□□□□□ -1.18
CLIP1P30622 AC005868.1-201ENST00000536421 331 ntBASIC7.69□□□□□ -1.18
CLIP1P30622 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.69□□□□□ -1.18
CLIP1P30622 AC093249.4-201ENST00000564755 259 ntBASIC7.69□□□□□ -1.18
CLIP1P30622 Z95327.3-201ENST00000610385 572 ntBASIC7.69□□□□□ -1.18
CLIP1P30622 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.69□□□□□ -1.18
CLIP1P30622 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
CLIP1P30622 AL356317.1-201ENST00000396110 1436 ntBASIC7.69□□□□□ -1.18
CLIP1P30622 DHX40P1-201ENST00000588725 1412 ntBASIC7.69□□□□□ -1.18
CLIP1P30622 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP1P30622 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP1P30622 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP1P30622 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms