Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC107982.1-201ENST00000507171 1300 ntBASIC5.59□□□□□ -1.51
CD40P25942 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CD40P25942 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CD40P25942 SNORD35A-201ENST00000363389 86 ntBASIC5.59□□□□□ -1.51
CD40P25942 RNU1-65P-201ENST00000363919 148 ntBASIC5.59□□□□□ -1.51
CD40P25942 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 RN7SKP281-201ENST00000410472 352 ntBASIC5.59□□□□□ -1.51
CD40P25942 RN7SKP142-201ENST00000411236 328 ntBASIC5.59□□□□□ -1.51
CD40P25942 AC068533.2-201ENST00000411872 306 ntBASIC5.59□□□□□ -1.51
CD40P25942 OSTCP4-201ENST00000424397 449 ntBASIC5.59□□□□□ -1.51
CD40P25942 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.59□□□□□ -1.51
CD40P25942 MGAT2P2-201ENST00000427194 797 ntBASIC5.59□□□□□ -1.51
CD40P25942 AC002069.1-201ENST00000429649 1159 ntBASIC5.59□□□□□ -1.51
CD40P25942 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.59□□□□□ -1.51
CD40P25942 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC5.59□□□□□ -1.51
CD40P25942 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.59□□□□□ -1.51
CD40P25942 ZNF114P1-201ENST00000453500 292 ntBASIC5.59□□□□□ -1.51
CD40P25942 MTCO3P11-201ENST00000455103 774 ntBASIC5.59□□□□□ -1.51
CD40P25942 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.59□□□□□ -1.51
CD40P25942 AC104339.1-201ENST00000465478 348 ntBASIC5.59□□□□□ -1.51
CD40P25942 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.59□□□□□ -1.51
CD40P25942 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.59□□□□□ -1.51
CD40P25942 AC010285.3-201ENST00000511668 676 ntBASIC5.59□□□□□ -1.51
CD40P25942 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC5.59□□□□□ -1.51
CD40P25942 AC022447.1-201ENST00000515358 464 ntBASIC5.59□□□□□ -1.51
CD40P25942 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.59□□□□□ -1.51
CD40P25942 HIGD1AP6-201ENST00000521833 279 ntBASIC5.59□□□□□ -1.51
CD40P25942 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.59□□□□□ -1.51
CD40P25942 AP001207.1-201ENST00000524051 481 ntBASIC5.59□□□□□ -1.51
CD40P25942 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.59□□□□□ -1.51
CD40P25942 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.59□□□□□ -1.51
CD40P25942 AC008055.1-201ENST00000547032 609 ntBASIC5.59□□□□□ -1.51
CD40P25942 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.59□□□□□ -1.51
CD40P25942 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.59□□□□□ -1.51
CD40P25942 HMGN2P47-201ENST00000559378 272 ntBASIC5.59□□□□□ -1.51
CD40P25942 AL078601.3-201ENST00000573303 535 ntBASIC5.59□□□□□ -1.51
CD40P25942 MIR4675-201ENST00000577898 77 ntBASIC5.59□□□□□ -1.51
CD40P25942 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.59□□□□□ -1.51
CD40P25942 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CD40P25942 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.59□□□□□ -1.51
CD40P25942 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
CD40P25942 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.59□□□□□ -1.51
CD40P25942 AC078795.2-201ENST00000602835 1252 ntBASIC5.59□□□□□ -1.51
CD40P25942 AL359704.2-201ENST00000604335 521 ntBASIC5.59□□□□□ -1.51
CD40P25942 AC091946.2-201ENST00000606105 291 ntBASIC5.59□□□□□ -1.51
CD40P25942 AL080312.2-201ENST00000613001 630 ntBASIC5.59□□□□□ -1.51
CD40P25942 AL445647.2-201ENST00000615170 130 ntBASIC5.59□□□□□ -1.51
CD40P25942 uc_338.31-201ENST00000615595 186 ntBASIC5.59□□□□□ -1.51
CD40P25942 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CD40P25942 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.59□□□□□ -1.51
CD40P25942 MRPL57P1-201ENST00000621486 265 ntBASIC5.59□□□□□ -1.51
CD40P25942 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.59□□□□□ -1.51
CD40P25942 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.59□□□□□ -1.51
CD40P25942 AC092192.1-201ENST00000633154 1018 ntBASIC5.59□□□□□ -1.51
CD40P25942 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.59□□□□□ -1.51
CD40P25942 AC099063.3-201ENST00000642066 185 ntBASIC5.59□□□□□ -1.51
CD40P25942 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.59□□□□□ -1.51
CD40P25942 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CD40P25942 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD40P25942 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CD40P25942 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.59□□□□□ -1.51
CD40P25942 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CD40P25942 SAGE3P-201ENST00000619800 1635 ntBASIC5.59□□□□□ -1.52
CD40P25942 CASC19-246ENST00000641625 1606 ntBASIC5.59□□□□□ -1.52
CD40P25942 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
CD40P25942 MROH3P-201ENST00000435735 2676 ntBASIC5.59□□□□□ -1.52
CD40P25942 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.59□□□□□ -1.52
CD40P25942 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.59□□□□□ -1.52
CD40P25942 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
CD40P25942 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CD40P25942 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD40P25942 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.58□□□□□ -1.52
CD40P25942 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CD40P25942 CAP1P2-201ENST00000417455 1409 ntBASIC5.58□□□□□ -1.52
CD40P25942 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.58□□□□□ -1.52
CD40P25942 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.58□□□□□ -1.52
CD40P25942 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD40P25942 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.58□□□□□ -1.52
CD40P25942 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.58□□□□□ -1.52
CD40P25942 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CD40P25942 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD40P25942 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD40P25942 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD40P25942 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC5.58□□□□□ -1.52
CD40P25942 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CD40P25942 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.58□□□□□ -1.52
CD40P25942 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD40P25942 OR2M1P-201ENST00000318104 951 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms