Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 FABP7P1-201ENST00000424004 391 ntBASIC4.76□□□□□ -1.65
COL5A1P20908 BMS1P19-201ENST00000433925 393 ntBASIC4.76□□□□□ -1.65
COL5A1P20908 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.76□□□□□ -1.65
COL5A1P20908 ARL2BPP10-201ENST00000446487 531 ntBASIC4.76□□□□□ -1.65
COL5A1P20908 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.76□□□□□ -1.65
COL5A1P20908 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.76□□□□□ -1.65
COL5A1P20908 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.76□□□□□ -1.65
COL5A1P20908 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.76□□□□□ -1.65
COL5A1P20908 OR2A3P-201ENST00000493774 953 ntBASIC4.76□□□□□ -1.65
COL5A1P20908 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.76□□□□□ -1.65
COL5A1P20908 RN7SKP92-201ENST00000517266 244 ntBASIC4.76□□□□□ -1.65
COL5A1P20908 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.76□□□□□ -1.65
COL5A1P20908 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
COL5A1P20908 AC084824.1-201ENST00000550917 1005 ntBASIC4.76□□□□□ -1.65
COL5A1P20908 AL109766.1-201ENST00000555080 552 ntBASIC4.76□□□□□ -1.65
COL5A1P20908 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
COL5A1P20908 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.76□□□□□ -1.65
COL5A1P20908 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.76□□□□□ -1.65
COL5A1P20908 AL031658.2-201ENST00000616850 651 ntBASIC4.76□□□□□ -1.65
COL5A1P20908 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A1P20908 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.76□□□□□ -1.65
COL5A1P20908 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A1P20908 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A1P20908 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.76□□□□□ -1.65
COL5A1P20908 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A1P20908 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A1P20908 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.76□□□□□ -1.65
COL5A1P20908 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A1P20908 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
COL5A1P20908 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.76□□□□□ -1.65
COL5A1P20908 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
COL5A1P20908 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A1P20908 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A1P20908 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A1P20908 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.76□□□□□ -1.65
COL5A1P20908 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A1P20908 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.76□□□□□ -1.65
COL5A1P20908 AC009506.2-201ENST00000420635 840 ntBASIC4.76□□□□□ -1.65
COL5A1P20908 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.76□□□□□ -1.65
COL5A1P20908 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.76□□□□□ -1.65
COL5A1P20908 RPL23AP1-201ENST00000428990 471 ntBASIC4.76□□□□□ -1.65
COL5A1P20908 AC009238.2-201ENST00000431026 355 ntBASIC4.76□□□□□ -1.65
COL5A1P20908 CBX1P1-201ENST00000440184 427 ntBASIC4.76□□□□□ -1.65
COL5A1P20908 AC016772.1-201ENST00000444170 1261 ntBASIC4.76□□□□□ -1.65
COL5A1P20908 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.76□□□□□ -1.65
COL5A1P20908 HMGB1P4-201ENST00000455362 567 ntBASIC4.76□□□□□ -1.65
COL5A1P20908 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.76□□□□□ -1.65
COL5A1P20908 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.76□□□□□ -1.65
COL5A1P20908 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.76□□□□□ -1.65
COL5A1P20908 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
COL5A1P20908 AC116553.2-201ENST00000564203 463 ntBASIC4.76□□□□□ -1.65
COL5A1P20908 AC005191.1-201ENST00000603950 358 ntBASIC4.76□□□□□ -1.65
COL5A1P20908 AL139041.1-201ENST00000605480 610 ntBASIC4.76□□□□□ -1.65
COL5A1P20908 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
COL5A1P20908 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A1P20908 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A1P20908 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL5A1P20908 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL5A1P20908 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
COL5A1P20908 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.75□□□□□ -1.65
COL5A1P20908 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL5A1P20908 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL5A1P20908 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
COL5A1P20908 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL5A1P20908 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL5A1P20908 MIR129-1-201ENST00000384972 72 ntBASIC4.75□□□□□ -1.65
COL5A1P20908 U3.32-201ENST00000408116 212 ntBASIC4.75□□□□□ -1.65
COL5A1P20908 OR2B7P-201ENST00000429302 934 ntBASIC4.75□□□□□ -1.65
COL5A1P20908 NPM1P33-201ENST00000438918 872 ntBASIC4.75□□□□□ -1.65
COL5A1P20908 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.75□□□□□ -1.65
COL5A1P20908 AL691482.1-201ENST00000453255 87 ntBASIC4.75□□□□□ -1.65
COL5A1P20908 AC016559.2-201ENST00000510759 359 ntBASIC4.75□□□□□ -1.65
COL5A1P20908 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC4.75□□□□□ -1.65
COL5A1P20908 HNRNPRP2-201ENST00000528421 743 ntBASIC4.75□□□□□ -1.65
COL5A1P20908 CYCSP29-201ENST00000533731 318 ntBASIC4.75□□□□□ -1.65
COL5A1P20908 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
COL5A1P20908 AC133555.2-201ENST00000550213 292 ntBASIC4.75□□□□□ -1.65
COL5A1P20908 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.75□□□□□ -1.65
COL5A1P20908 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.75□□□□□ -1.65
COL5A1P20908 AC007382.1-201ENST00000624376 2618 ntBASIC4.75□□□□□ -1.65
COL5A1P20908 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
COL5A1P20908 SMG1P7-201ENST00000565246 2704 ntBASIC4.75□□□□□ -1.65
COL5A1P20908 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL5A1P20908 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
COL5A1P20908 OR56B2P-202ENST00000641377 2453 ntBASIC4.75□□□□□ -1.65
COL5A1P20908 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL5A1P20908 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL5A1P20908 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.75□□□□□ -1.65
COL5A1P20908 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL5A1P20908 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL5A1P20908 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
COL5A1P20908 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.74□□□□□ -1.65
COL5A1P20908 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
COL5A1P20908 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
COL5A1P20908 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL5A1P20908 AL359837.1-201ENST00000381357 287 ntBASIC4.74□□□□□ -1.65
COL5A1P20908 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
COL5A1P20908 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.74□□□□□ -1.65
COL5A1P20908 EIF2S2P2-201ENST00000447161 982 ntBASIC4.74□□□□□ -1.65
COL5A1P20908 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms