Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
NFKB1P19838 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.96□□□□□ -1.3
NFKB1P19838 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.96□□□□□ -1.3
NFKB1P19838 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.96□□□□□ -1.3
NFKB1P19838 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
NFKB1P19838 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.96□□□□□ -1.3
NFKB1P19838 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NFKB1P19838 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.95□□□□□ -1.3
NFKB1P19838 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NFKB1P19838 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
NFKB1P19838 OR2A3P-202ENST00000641249 1776 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 OR52B5P-204ENST00000641744 3467 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NFKB1P19838 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.95□□□□□ -1.3
NFKB1P19838 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NFKB1P19838 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.95□□□□□ -1.3
NFKB1P19838 TMSB4XP2-201ENST00000335179 210 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.95□□□□□ -1.3
NFKB1P19838 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NFKB1P19838 PPIAP26-201ENST00000377951 522 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 RNU6-1227P-201ENST00000383981 107 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 Y_RNA.460-201ENST00000384255 102 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
NFKB1P19838 AL161909.1-201ENST00000397390 712 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 AL034403.1-201ENST00000399414 885 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 RN7SKP117-201ENST00000410175 264 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.95□□□□□ -1.3
NFKB1P19838 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.95□□□□□ -1.3
NFKB1P19838 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC6.95□□□□□ -1.3
NFKB1P19838 ELOBP4-201ENST00000423418 296 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NFKB1P19838 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
NFKB1P19838 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.95□□□□□ -1.3
NFKB1P19838 HSPE1P16-201ENST00000426640 348 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC6.95□□□□□ -1.3
NFKB1P19838 HSPD1P12-201ENST00000429127 1069 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC6.95□□□□□ -1.3
NFKB1P19838 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.95□□□□□ -1.3
NFKB1P19838 AL831737.1-201ENST00000441288 271 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.95□□□□□ -1.3
NFKB1P19838 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.95□□□□□ -1.3
NFKB1P19838 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC6.95□□□□□ -1.3
NFKB1P19838 OFD1P4Y-201ENST00000455273 1179 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 snoU109.1-201ENST00000459339 135 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 RPS16P9-201ENST00000477220 427 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 RPS29P25-201ENST00000481709 171 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 RN7SL382P-201ENST00000482631 282 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.95□□□□□ -1.3
NFKB1P19838 RPL10P7-201ENST00000495649 625 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.95□□□□□ -1.3
NFKB1P19838 AC073648.3-201ENST00000504939 925 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC6.95□□□□□ -1.3
NFKB1P19838 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.95□□□□□ -1.3
NFKB1P19838 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC6.95□□□□□ -1.3
NFKB1P19838 RNU6-416P-201ENST00000516265 103 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 OR5M7P-201ENST00000526140 972 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC6.95□□□□□ -1.3
NFKB1P19838 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.95□□□□□ -1.3
NFKB1P19838 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.95□□□□□ -1.3
NFKB1P19838 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NFKB1P19838 PPIAP6-201ENST00000557078 499 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NFKB1P19838 MIR3671-201ENST00000580455 88 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 AC015818.6-201ENST00000584274 634 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
NFKB1P19838 AL121655.1-201ENST00000605811 308 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.95□□□□□ -1.3
NFKB1P19838 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC6.95□□□□□ -1.3
NFKB1P19838 HTR1DP1-201ENST00000616500 888 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.95□□□□□ -1.3
NFKB1P19838 CRYM-AS1-204ENST00000637983 556 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
NFKB1P19838 AL136531.3-201ENST00000624378 3658 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.95□□□□□ -1.3
NFKB1P19838 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
NFKB1P19838 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.95□□□□□ -1.3
NFKB1P19838 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NFKB1P19838 AC119674.1-204ENST00000641348 1343 ntBASIC6.95□□□□□ -1.3
NFKB1P19838 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NFKB1P19838 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NFKB1P19838 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.95□□□□□ -1.3
NFKB1P19838 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NFKB1P19838 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.94□□□□□ -1.3
NFKB1P19838 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NFKB1P19838 AC068733.2-201ENST00000605434 1418 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NFKB1P19838 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
NFKB1P19838 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
NFKB1P19838 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.94□□□□□ -1.3
NFKB1P19838 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NFKB1P19838 RPL24P4-201ENST00000326586 421 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 OR10D1P-201ENST00000355343 936 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 RNU6-1339P-201ENST00000363574 91 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 Y_RNA.279-201ENST00000364763 95 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC6.94□□□□□ -1.3
NFKB1P19838 Y_RNA.529-201ENST00000384586 119 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 RNA5SP176-201ENST00000390956 110 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 RNA5SP35-201ENST00000391257 129 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms