Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MLECP1-201ENST00000615893 709 ntBASIC5.48□□□□□ -1.53
COL11A1P12107 AC012414.7-202ENST00000622705 1090 ntBASIC5.48□□□□□ -1.53
COL11A1P12107 AC021106.3-201ENST00000623925 531 ntBASIC5.48□□□□□ -1.53
COL11A1P12107 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL11A1P12107 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL11A1P12107 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.48□□□□□ -1.53
COL11A1P12107 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
COL11A1P12107 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL11A1P12107 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL11A1P12107 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.48□□□□□ -1.53
COL11A1P12107 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL11A1P12107 RPL32P3-201ENST00000359025 275 ntBASIC5.48□□□□□ -1.53
COL11A1P12107 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
COL11A1P12107 U3.22-201ENST00000391120 215 ntBASIC5.48□□□□□ -1.53
COL11A1P12107 RNA5SP397-201ENST00000391323 118 ntBASIC5.48□□□□□ -1.53
COL11A1P12107 RGS17P1-201ENST00000423358 553 ntBASIC5.48□□□□□ -1.53
COL11A1P12107 CENPIP1-201ENST00000425713 902 ntBASIC5.48□□□□□ -1.53
COL11A1P12107 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.48□□□□□ -1.53
COL11A1P12107 AC004980.3-201ENST00000447046 365 ntBASIC5.48□□□□□ -1.53
COL11A1P12107 RPL7AP28-201ENST00000464513 571 ntBASIC5.48□□□□□ -1.53
COL11A1P12107 NIFKP7-201ENST00000503365 834 ntBASIC5.48□□□□□ -1.53
COL11A1P12107 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.48□□□□□ -1.53
COL11A1P12107 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.48□□□□□ -1.53
COL11A1P12107 AC026688.1-201ENST00000520639 1168 ntBASIC5.48□□□□□ -1.53
COL11A1P12107 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.48□□□□□ -1.53
COL11A1P12107 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.48□□□□□ -1.53
COL11A1P12107 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.48□□□□□ -1.53
COL11A1P12107 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.48□□□□□ -1.53
COL11A1P12107 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.48□□□□□ -1.53
COL11A1P12107 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.48□□□□□ -1.53
COL11A1P12107 MIR4675-201ENST00000577898 77 ntBASIC5.48□□□□□ -1.53
COL11A1P12107 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL11A1P12107 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.48□□□□□ -1.53
COL11A1P12107 AC114781.5-201ENST00000615297 108 ntBASIC5.48□□□□□ -1.53
COL11A1P12107 AL049794.2-201ENST00000616301 365 ntBASIC5.48□□□□□ -1.53
COL11A1P12107 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.48□□□□□ -1.53
COL11A1P12107 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.48□□□□□ -1.53
COL11A1P12107 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL11A1P12107 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL11A1P12107 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL11A1P12107 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
COL11A1P12107 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.47□□□□□ -1.53
COL11A1P12107 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL11A1P12107 AC140134.1-201ENST00000511830 3544 ntBASIC5.47□□□□□ -1.53
COL11A1P12107 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.47□□□□□ -1.53
COL11A1P12107 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
COL11A1P12107 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL11A1P12107 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.47□□□□□ -1.53
COL11A1P12107 COX5BP7-201ENST00000414780 274 ntBASIC5.47□□□□□ -1.53
COL11A1P12107 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.47□□□□□ -1.53
COL11A1P12107 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.47□□□□□ -1.53
COL11A1P12107 RSL24D1P6-201ENST00000426934 401 ntBASIC5.47□□□□□ -1.53
COL11A1P12107 RPS17P8-201ENST00000434525 335 ntBASIC5.47□□□□□ -1.53
COL11A1P12107 YWHAZP2-201ENST00000440317 728 ntBASIC5.47□□□□□ -1.53
COL11A1P12107 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.47□□□□□ -1.53
COL11A1P12107 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.47□□□□□ -1.53
COL11A1P12107 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL11A1P12107 AL161747.1-201ENST00000480068 358 ntBASIC5.47□□□□□ -1.53
COL11A1P12107 AC083829.1-201ENST00000503756 657 ntBASIC5.47□□□□□ -1.53
COL11A1P12107 AC111000.3-201ENST00000508057 576 ntBASIC5.47□□□□□ -1.53
COL11A1P12107 AC007016.1-201ENST00000512110 244 ntBASIC5.47□□□□□ -1.53
COL11A1P12107 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.47□□□□□ -1.53
COL11A1P12107 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.47□□□□□ -1.53
COL11A1P12107 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.47□□□□□ -1.53
COL11A1P12107 AP001781.1-201ENST00000530977 207 ntBASIC5.47□□□□□ -1.53
COL11A1P12107 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL11A1P12107 AC136624.4-201ENST00000573044 370 ntBASIC5.47□□□□□ -1.53
COL11A1P12107 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL11A1P12107 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.47□□□□□ -1.53
COL11A1P12107 RPL12P25-202ENST00000598100 674 ntBASIC5.47□□□□□ -1.53
COL11A1P12107 BX005214.3-202ENST00000619809 325 ntBASIC5.47□□□□□ -1.53
COL11A1P12107 AP000843.1-201ENST00000624880 701 ntBASIC5.47□□□□□ -1.53
COL11A1P12107 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.47□□□□□ -1.53
COL11A1P12107 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.47□□□□□ -1.53
COL11A1P12107 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL11A1P12107 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL11A1P12107 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL11A1P12107 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL11A1P12107 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.47□□□□□ -1.53
COL11A1P12107 ADAM24P-201ENST00000398655 2101 ntBASIC5.47□□□□□ -1.53
COL11A1P12107 SNORA70.2-201ENST00000364506 135 ntBASIC5.46□□□□□ -1.53
COL11A1P12107 SNORA57.1-201ENST00000391227 145 ntBASIC5.46□□□□□ -1.53
COL11A1P12107 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.46□□□□□ -1.53
COL11A1P12107 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
COL11A1P12107 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.46□□□□□ -1.53
COL11A1P12107 VN1R37P-201ENST00000419096 748 ntBASIC5.46□□□□□ -1.53
COL11A1P12107 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.46□□□□□ -1.53
COL11A1P12107 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.46□□□□□ -1.53
COL11A1P12107 snoU13.1-201ENST00000459157 104 ntBASIC5.46□□□□□ -1.53
COL11A1P12107 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COL11A1P12107 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.46□□□□□ -1.53
COL11A1P12107 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.46□□□□□ -1.53
COL11A1P12107 TOMM20P2-201ENST00000540082 421 ntBASIC5.46□□□□□ -1.53
COL11A1P12107 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.46□□□□□ -1.53
COL11A1P12107 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
COL11A1P12107 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.46□□□□□ -1.53
COL11A1P12107 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
COL11A1P12107 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.46□□□□□ -1.54
COL11A1P12107 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL11A1P12107 ZFRP1-201ENST00000457579 2970 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms