Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC105233.1-201ENST00000498840 781 ntBASIC4.93□□□□□ -1.62
HOXC4P09017 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC4P09017 AC138409.2-202ENST00000507274 458 ntBASIC4.93□□□□□ -1.62
HOXC4P09017 MRPS33P2-201ENST00000507850 322 ntBASIC4.93□□□□□ -1.62
HOXC4P09017 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXC4P09017 IGKV1-32-201ENST00000519290 311 ntBASIC4.93□□□□□ -1.62
HOXC4P09017 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXC4P09017 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.93□□□□□ -1.62
HOXC4P09017 AC012339.2-201ENST00000523996 453 ntBASIC4.93□□□□□ -1.62
HOXC4P09017 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.93□□□□□ -1.62
HOXC4P09017 GCSHP4-201ENST00000538792 439 ntBASIC4.93□□□□□ -1.62
HOXC4P09017 AC040958.1-201ENST00000561102 201 ntBASIC4.93□□□□□ -1.62
HOXC4P09017 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC4P09017 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
HOXC4P09017 AC087783.2-201ENST00000605070 562 ntBASIC4.93□□□□□ -1.62
HOXC4P09017 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXC4P09017 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXC4P09017 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXC4P09017 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC4P09017 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC4P09017 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXC4P09017 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC4P09017 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC4P09017 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC4P09017 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HOXC4P09017 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC4P09017 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXC4P09017 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HOXC4P09017 ECM1P2-201ENST00000503354 1577 ntBASIC4.92□□□□□ -1.62
HOXC4P09017 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC4P09017 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HOXC4P09017 RNA5SP296-201ENST00000410523 111 ntBASIC4.92□□□□□ -1.62
HOXC4P09017 AL445213.1-201ENST00000412589 747 ntBASIC4.92□□□□□ -1.62
HOXC4P09017 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC4P09017 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC4P09017 AL049745.1-201ENST00000433953 286 ntBASIC4.92□□□□□ -1.62
HOXC4P09017 TXNP5-201ENST00000441043 315 ntBASIC4.92□□□□□ -1.62
HOXC4P09017 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC4P09017 OR52J1P-201ENST00000450596 932 ntBASIC4.92□□□□□ -1.62
HOXC4P09017 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC4P09017 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC4P09017 AC083982.1-201ENST00000485679 344 ntBASIC4.92□□□□□ -1.62
HOXC4P09017 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXC4P09017 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC4P09017 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC4P09017 SETP1-201ENST00000556014 845 ntBASIC4.92□□□□□ -1.62
HOXC4P09017 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC4P09017 EIF1P5-201ENST00000585002 234 ntBASIC4.92□□□□□ -1.62
HOXC4P09017 AC016252.1-201ENST00000609721 474 ntBASIC4.92□□□□□ -1.62
HOXC4P09017 AC091953.3-201ENST00000623220 236 ntBASIC4.92□□□□□ -1.62
HOXC4P09017 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC4P09017 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC4P09017 SAMMSON-213ENST00000641336 1521 ntBASIC4.92□□□□□ -1.62
HOXC4P09017 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC4P09017 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC4P09017 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HOXC4P09017 IRF5P1-201ENST00000504852 2164 ntBASIC4.91□□□□□ -1.62
HOXC4P09017 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXC4P09017 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC4P09017 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
HOXC4P09017 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
HOXC4P09017 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC4P09017 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC4P09017 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC4P09017 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC4P09017 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
HOXC4P09017 MIR585-201ENST00000384887 94 ntBASIC4.91□□□□□ -1.62
HOXC4P09017 RPL12P9-201ENST00000412942 488 ntBASIC4.91□□□□□ -1.62
HOXC4P09017 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXC4P09017 HYALP1-201ENST00000417674 1279 ntBASIC4.91□□□□□ -1.62
HOXC4P09017 OR6C64P-201ENST00000419708 825 ntBASIC4.91□□□□□ -1.62
HOXC4P09017 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXC4P09017 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXC4P09017 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HOXC4P09017 SLC25A18P1-201ENST00000449385 454 ntBASIC4.91□□□□□ -1.62
HOXC4P09017 RBMY2TP-201ENST00000451162 947 ntBASIC4.91□□□□□ -1.62
HOXC4P09017 PRPF38AP1-201ENST00000451976 933 ntBASIC4.91□□□□□ -1.62
HOXC4P09017 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.91□□□□□ -1.62
HOXC4P09017 SEPT7P3-201ENST00000455017 621 ntBASIC4.91□□□□□ -1.62
HOXC4P09017 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
HOXC4P09017 AC069304.1-201ENST00000491593 704 ntBASIC4.91□□□□□ -1.62
HOXC4P09017 AL049874.2-201ENST00000492636 288 ntBASIC4.91□□□□□ -1.62
HOXC4P09017 KATNBL1P4-201ENST00000503545 918 ntBASIC4.91□□□□□ -1.62
HOXC4P09017 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXC4P09017 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXC4P09017 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXC4P09017 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC4P09017 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
HOXC4P09017 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.91□□□□□ -1.62
HOXC4P09017 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC4P09017 AC026367.3-201ENST00000619032 590 ntBASIC4.91□□□□□ -1.62
HOXC4P09017 AC073342.3-201ENST00000624211 193 ntBASIC4.91□□□□□ -1.62
HOXC4P09017 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC4P09017 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC4P09017 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC4P09017 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXC4P09017 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC4P09017 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC4P09017 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC4P09017 AL121839.2-201ENST00000565058 6943 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms