Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AL357153.4-201ENST00000620487 1016 ntBASIC5□□□□□ -1.61
SHOX2O60902 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
SHOX2O60902 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
SHOX2O60902 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5□□□□□ -1.61
SHOX2O60902 SCN1A-220ENST00000641603 12506 ntBASIC5□□□□□ -1.61
SHOX2O60902 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5□□□□□ -1.61
SHOX2O60902 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHOX2O60902 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHOX2O60902 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHOX2O60902 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SHOX2O60902 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5□□□□□ -1.61
SHOX2O60902 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SHOX2O60902 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SHOX2O60902 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHOX2O60902 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHOX2O60902 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHOX2O60902 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHOX2O60902 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHOX2O60902 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.99□□□□□ -1.61
SHOX2O60902 MIR375-201ENST00000362103 64 ntBASIC4.99□□□□□ -1.61
SHOX2O60902 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SHOX2O60902 SNORA17A-201ENST00000391185 133 ntBASIC4.99□□□□□ -1.61
SHOX2O60902 LYPLA1P3-201ENST00000402650 695 ntBASIC4.99□□□□□ -1.61
SHOX2O60902 CBX1P3-201ENST00000413296 527 ntBASIC4.99□□□□□ -1.61
SHOX2O60902 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.99□□□□□ -1.61
SHOX2O60902 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.99□□□□□ -1.61
SHOX2O60902 TMX2P1-201ENST00000436507 708 ntBASIC4.99□□□□□ -1.61
SHOX2O60902 AL606490.8-201ENST00000441624 319 ntBASIC4.99□□□□□ -1.61
SHOX2O60902 AL589765.3-201ENST00000446084 462 ntBASIC4.99□□□□□ -1.61
SHOX2O60902 RPL5P30-201ENST00000465511 891 ntBASIC4.99□□□□□ -1.61
SHOX2O60902 NIP7P2-201ENST00000485801 544 ntBASIC4.99□□□□□ -1.61
SHOX2O60902 RN7SL629P-201ENST00000489622 285 ntBASIC4.99□□□□□ -1.61
SHOX2O60902 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.99□□□□□ -1.61
SHOX2O60902 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.99□□□□□ -1.61
SHOX2O60902 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.99□□□□□ -1.61
SHOX2O60902 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.99□□□□□ -1.61
SHOX2O60902 RNA5SP373-201ENST00000517271 95 ntBASIC4.99□□□□□ -1.61
SHOX2O60902 AC026688.1-201ENST00000520639 1168 ntBASIC4.99□□□□□ -1.61
SHOX2O60902 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHOX2O60902 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.99□□□□□ -1.61
SHOX2O60902 AC060766.1-201ENST00000590824 627 ntBASIC4.99□□□□□ -1.61
SHOX2O60902 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.99□□□□□ -1.61
SHOX2O60902 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHOX2O60902 AL008729.2-201ENST00000606393 473 ntBASIC4.99□□□□□ -1.61
SHOX2O60902 MIR6826-201ENST00000617808 98 ntBASIC4.99□□□□□ -1.61
SHOX2O60902 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.99□□□□□ -1.61
SHOX2O60902 SNORA17.5-201ENST00000630429 132 ntBASIC4.99□□□□□ -1.61
SHOX2O60902 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.99□□□□□ -1.61
SHOX2O60902 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHOX2O60902 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.99□□□□□ -1.61
SHOX2O60902 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SHOX2O60902 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHOX2O60902 AC091305.2-201ENST00000624049 1576 ntBASIC4.99□□□□□ -1.61
SHOX2O60902 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHOX2O60902 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.98□□□□□ -1.61
SHOX2O60902 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.98□□□□□ -1.61
SHOX2O60902 DDX18P6-201ENST00000450119 1997 ntBASIC4.98□□□□□ -1.61
SHOX2O60902 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.98□□□□□ -1.61
SHOX2O60902 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
SHOX2O60902 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SHOX2O60902 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.98□□□□□ -1.61
SHOX2O60902 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SHOX2O60902 OR52B3P-201ENST00000314715 928 ntBASIC4.98□□□□□ -1.61
SHOX2O60902 RNA5SP52-201ENST00000362448 134 ntBASIC4.98□□□□□ -1.61
SHOX2O60902 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SHOX2O60902 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.98□□□□□ -1.61
SHOX2O60902 RN7SKP278-201ENST00000410504 342 ntBASIC4.98□□□□□ -1.61
SHOX2O60902 GSTM3P2-201ENST00000412746 530 ntBASIC4.98□□□□□ -1.61
SHOX2O60902 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.98□□□□□ -1.61
SHOX2O60902 BX510359.3-201ENST00000422168 306 ntBASIC4.98□□□□□ -1.61
SHOX2O60902 AL133173.1-201ENST00000423458 397 ntBASIC4.98□□□□□ -1.61
SHOX2O60902 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.98□□□□□ -1.61
SHOX2O60902 DYNLL1P7-201ENST00000429273 258 ntBASIC4.98□□□□□ -1.61
SHOX2O60902 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.98□□□□□ -1.61
SHOX2O60902 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.98□□□□□ -1.61
SHOX2O60902 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.98□□□□□ -1.61
SHOX2O60902 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.98□□□□□ -1.61
SHOX2O60902 AC019185.1-201ENST00000442718 389 ntBASIC4.98□□□□□ -1.61
SHOX2O60902 EEF1B2P6-201ENST00000445713 673 ntBASIC4.98□□□□□ -1.61
SHOX2O60902 HMGB1P4-201ENST00000455362 567 ntBASIC4.98□□□□□ -1.61
SHOX2O60902 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
SHOX2O60902 RPS26P28-201ENST00000470806 348 ntBASIC4.98□□□□□ -1.61
SHOX2O60902 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.98□□□□□ -1.61
SHOX2O60902 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.98□□□□□ -1.61
SHOX2O60902 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.98□□□□□ -1.61
SHOX2O60902 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.98□□□□□ -1.61
SHOX2O60902 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.98□□□□□ -1.61
SHOX2O60902 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHOX2O60902 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.98□□□□□ -1.61
SHOX2O60902 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.98□□□□□ -1.61
SHOX2O60902 AC092747.4-201ENST00000620519 1861 ntBASIC4.98□□□□□ -1.61
SHOX2O60902 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHOX2O60902 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SHOX2O60902 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
SHOX2O60902 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHOX2O60902 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHOX2O60902 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHOX2O60902 U3.3-201ENST00000362986 216 ntBASIC4.97□□□□□ -1.61
SHOX2O60902 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHOX2O60902 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms