Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.14□□□□□ -1.59
RIPK2O43353 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RIPK2O43353 CYCSP11-201ENST00000436426 315 ntBASIC5.14□□□□□ -1.59
RIPK2O43353 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.14□□□□□ -1.59
RIPK2O43353 MTND6P18-201ENST00000439477 513 ntBASIC5.14□□□□□ -1.59
RIPK2O43353 AL450023.3-201ENST00000440592 271 ntBASIC5.14□□□□□ -1.59
RIPK2O43353 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.14□□□□□ -1.59
RIPK2O43353 AL691482.1-201ENST00000453255 87 ntBASIC5.14□□□□□ -1.59
RIPK2O43353 RANP1-206ENST00000455094 651 ntBASIC5.14□□□□□ -1.59
RIPK2O43353 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.14□□□□□ -1.59
RIPK2O43353 RPS17P2-201ENST00000461663 408 ntBASIC5.14□□□□□ -1.59
RIPK2O43353 AC096741.1-201ENST00000472250 846 ntBASIC5.14□□□□□ -1.59
RIPK2O43353 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.14□□□□□ -1.59
RIPK2O43353 LARP7P4-201ENST00000481075 878 ntBASIC5.14□□□□□ -1.59
RIPK2O43353 RN7SL346P-201ENST00000491561 294 ntBASIC5.14□□□□□ -1.59
RIPK2O43353 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RIPK2O43353 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.14□□□□□ -1.59
RIPK2O43353 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.14□□□□□ -1.59
RIPK2O43353 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.14□□□□□ -1.59
RIPK2O43353 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.14□□□□□ -1.59
RIPK2O43353 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.14□□□□□ -1.59
RIPK2O43353 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RIPK2O43353 AC087888.1-201ENST00000550884 1254 ntBASIC5.14□□□□□ -1.59
RIPK2O43353 AL390726.5-202ENST00000564800 256 ntBASIC5.14□□□□□ -1.59
RIPK2O43353 AC010547.6-201ENST00000571789 193 ntBASIC5.14□□□□□ -1.59
RIPK2O43353 MIR1273E-201ENST00000581165 102 ntBASIC5.14□□□□□ -1.59
RIPK2O43353 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RIPK2O43353 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.14□□□□□ -1.59
RIPK2O43353 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.14□□□□□ -1.59
RIPK2O43353 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.14□□□□□ -1.59
RIPK2O43353 AC135068.12-201ENST00000637370 931 ntBASIC5.14□□□□□ -1.59
RIPK2O43353 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.14□□□□□ -1.59
RIPK2O43353 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RIPK2O43353 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RIPK2O43353 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RIPK2O43353 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RIPK2O43353 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RIPK2O43353 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RIPK2O43353 AL133268.1-201ENST00000405676 1401 ntBASIC5.14□□□□□ -1.59
RIPK2O43353 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RIPK2O43353 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RIPK2O43353 AC090971.4-201ENST00000560291 1800 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
RIPK2O43353 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RIPK2O43353 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RIPK2O43353 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RIPK2O43353 PANDAR-201ENST00000629595 1506 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RIPK2O43353 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RIPK2O43353 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RIPK2O43353 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
RIPK2O43353 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RIPK2O43353 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RIPK2O43353 RNA5SP339-201ENST00000390987 122 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 AP000580.1-201ENST00000404439 358 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 MTCYBP7-201ENST00000419540 1134 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 AC099336.2-201ENST00000422457 254 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 RPS4XP16-201ENST00000427198 791 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.13□□□□□ -1.59
RIPK2O43353 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RIPK2O43353 CALM1P2-201ENST00000452941 448 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 RPL31P53-201ENST00000457065 348 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 AC099560.2-201ENST00000457554 255 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.13□□□□□ -1.59
RIPK2O43353 RPL7P6-201ENST00000480903 738 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 AC008410.1-201ENST00000483777 339 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 RNU6-941P-201ENST00000516346 108 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.13□□□□□ -1.59
RIPK2O43353 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.13□□□□□ -1.59
RIPK2O43353 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.13□□□□□ -1.59
RIPK2O43353 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.13□□□□□ -1.59
RIPK2O43353 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.13□□□□□ -1.59
RIPK2O43353 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.13□□□□□ -1.59
RIPK2O43353 AP005901.4-201ENST00000577336 569 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 AP005262.1-201ENST00000582646 997 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 FAM60CP-201ENST00000591086 664 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 RPSAP73-201ENST00000614820 330 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.13□□□□□ -1.59
RIPK2O43353 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.13□□□□□ -1.59
RIPK2O43353 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.13□□□□□ -1.59
RIPK2O43353 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RIPK2O43353 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RIPK2O43353 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.13□□□□□ -1.59
RIPK2O43353 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RIPK2O43353 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RIPK2O43353 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RIPK2O43353 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.13□□□□□ -1.59
RIPK2O43353 CASC19-206ENST00000641028 1430 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 PHKBP1-201ENST00000450951 1951 ntBASIC5.13□□□□□ -1.59
RIPK2O43353 AL451142.2-201ENST00000429076 2090 ntBASIC5.12□□□□□ -1.59
RIPK2O43353 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RIPK2O43353 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
RIPK2O43353 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
RIPK2O43353 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RIPK2O43353 DHX9P1-201ENST00000436565 3076 ntBASIC5.12□□□□□ -1.59
RIPK2O43353 AC008549.2-201ENST00000333482 706 ntBASIC5.12□□□□□ -1.59
RIPK2O43353 LRRC37BP1-201ENST00000398851 714 ntBASIC5.12□□□□□ -1.59
RIPK2O43353 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.12□□□□□ -1.59
RIPK2O43353 SLC35E1P1-201ENST00000419313 864 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms