Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 DHX9P1-201ENST00000436565 3076 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 RN7SKP186-201ENST00000365371 303 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 RN7SKP100-201ENST00000411258 284 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 RGS17P1-201ENST00000423358 553 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 RPL5P25-201ENST00000441148 775 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 AC073264.2-201ENST00000448886 166 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 AC079168.2-201ENST00000453977 416 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 RN7SL189P-201ENST00000468631 289 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 AP001880.2-201ENST00000538233 448 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 NDUFB4P11-201ENST00000560510 395 ntBASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
KIAA1549Q9HCM3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 AC126755.2-208ENST00000327792 462 ntBASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 AC138969.1-213ENST00000331436 462 ntBASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 AL807761.1-201ENST00000417622 171 ntBASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 AL049745.1-201ENST00000433953 286 ntBASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 AL772161.1-201ENST00000439130 476 ntBASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 AC096741.1-201ENST00000472250 846 ntBASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 RPS29P22-201ENST00000472363 168 ntBASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 RNU6-709P-201ENST00000517257 104 ntBASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 OR5AN2P-201ENST00000534535 896 ntBASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 AC063949.1-201ENST00000552900 865 ntBASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 HMGN2P47-201ENST00000559378 272 ntBASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 RN7SL690P-201ENST00000582087 240 ntBASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 ELOCP28-201ENST00000590044 317 ntBASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 AC011487.3-201ENST00000593607 453 ntBASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 AC090181.2-201ENST00000602975 672 ntBASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 FRG1EP-201ENST00000634469 770 ntBASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KIAA1549Q9HCM3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 NOL8P1-201ENST00000508336 3529 ntBASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 AP002512.4-202ENST00000641599 4530 ntBASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 AC125336.1-201ENST00000508893 2827 ntBASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 AC069213.2-201ENST00000420238 366 ntBASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 USP9YP9-201ENST00000429406 715 ntBASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 RPL12P18-201ENST00000437175 325 ntBASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 PRPF38AP2-201ENST00000438179 851 ntBASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 AC092593.2-201ENST00000513866 913 ntBASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 AC006349.1-201ENST00000555526 235 ntBASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 UBE2FP2-201ENST00000566646 462 ntBASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 RN7SL371P-201ENST00000578099 267 ntBASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 AC104785.1-201ENST00000603220 588 ntBASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 SOCS5P3-201ENST00000425115 1576 ntBASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 AC002525.1-201ENST00000624392 1622 ntBASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 SNORA70.10-201ENST00000384515 134 ntBASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 ARL4AP5-201ENST00000404372 599 ntBASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 NPM1P40-201ENST00000412758 733 ntBASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 FAR2P2-201ENST00000413041 594 ntBASIC4.42□□□□□ -1.7
KIAA1549Q9HCM3 SETP9-201ENST00000423837 832 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms