Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC100757.1-201ENST00000616872 1835 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 MIR133A2-201ENST00000347538 102 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 RN7SKP6-201ENST00000364795 319 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 RNU6-925P-201ENST00000384629 104 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 ADAM24P-201ENST00000398655 2101 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 PPIAP9-201ENST00000403866 498 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AL158825.1-201ENST00000414735 521 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC008173.1-201ENST00000418901 264 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 MTCO3P4-201ENST00000419236 787 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC115283.1-201ENST00000427353 400 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 MTCO1P43-201ENST00000431831 488 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC092106.1-201ENST00000444291 373 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AL450023.1-201ENST00000450868 751 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 VDAC2P4-201ENST00000452925 711 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AL354710.1-201ENST00000453641 246 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 RPL7AP52-201ENST00000458096 790 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 RPL7P48-201ENST00000461513 746 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 RPL21P6-201ENST00000479171 504 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC104687.1-201ENST00000485829 412 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 NPM1P28-201ENST00000492269 840 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 TPT1P3-201ENST00000492841 512 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 CAB39P1-201ENST00000502277 460 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC093890.1-201ENST00000502554 540 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC133963.2-201ENST00000513686 578 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 CYCSP22-201ENST00000517555 339 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC106734.1-201ENST00000568646 663 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC097504.2-201ENST00000608088 454 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AP005229.2-201ENST00000609980 697 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC008759.3-201ENST00000613300 508 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC005156.1-201ENST00000613371 573 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AP005431.1-201ENST00000618479 319 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC093875.1-201ENST00000623688 504 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 AC073869.8-201ENST00000641806 335 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 TRIM51GP-201ENST00000534741 1350 ntBASIC5.28□□□□□ -1.56
BRF2Q9HAW0 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BRF2Q9HAW0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
BRF2Q9HAW0 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.27□□□□□ -1.57
BRF2Q9HAW0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
BRF2Q9HAW0 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
BRF2Q9HAW0 AL360270.2-201ENST00000562952 5985 ntBASIC5.27□□□□□ -1.57
BRF2Q9HAW0 AC083843.2-201ENST00000568248 6253 ntBASIC5.27□□□□□ -1.57
BRF2Q9HAW0 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
BRF2Q9HAW0 YES1P1-201ENST00000418510 1628 ntBASIC5.27□□□□□ -1.57
BRF2Q9HAW0 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.27□□□□□ -1.57
BRF2Q9HAW0 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
BRF2Q9HAW0 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
BRF2Q9HAW0 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
BRF2Q9HAW0 SNORA62.2-201ENST00000364672 152 ntBASIC5.27□□□□□ -1.57
BRF2Q9HAW0 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
BRF2Q9HAW0 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.27□□□□□ -1.57
BRF2Q9HAW0 NPM1P40-201ENST00000412758 733 ntBASIC5.27□□□□□ -1.57
BRF2Q9HAW0 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.27□□□□□ -1.57
BRF2Q9HAW0 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.27□□□□□ -1.57
BRF2Q9HAW0 OR2AT2P-201ENST00000413438 905 ntBASIC5.27□□□□□ -1.57
BRF2Q9HAW0 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.27□□□□□ -1.57
BRF2Q9HAW0 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
BRF2Q9HAW0 GNG5P5-201ENST00000420444 220 ntBASIC5.27□□□□□ -1.57
BRF2Q9HAW0 RPL24P2-201ENST00000421023 475 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms