Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SCAPERQ9BY12 AC010632.3-201ENST00000611377 369 ntBASIC7.45□□□□□ -1.22
SCAPERQ9BY12 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SCAPERQ9BY12 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC7.45□□□□□ -1.22
SCAPERQ9BY12 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC7.45□□□□□ -1.22
SCAPERQ9BY12 OR56B2P-202ENST00000641377 2453 ntBASIC7.45□□□□□ -1.22
SCAPERQ9BY12 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
SCAPERQ9BY12 AC108751.5-201ENST00000492880 1336 ntBASIC7.45□□□□□ -1.22
SCAPERQ9BY12 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SCAPERQ9BY12 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 Z95152.1-201ENST00000453556 656 ntBASIC7.44□□□□□ -1.22
SCAPERQ9BY12 HMGB1P4-201ENST00000455362 567 ntBASIC7.44□□□□□ -1.22
SCAPERQ9BY12 MTND2P28-201ENST00000457540 1044 ntBASIC7.44□□□□□ -1.22
SCAPERQ9BY12 SSR3-206ENST00000476217 807 ntTSL 3 BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 RPL7AP10-201ENST00000481016 791 ntBASIC7.44□□□□□ -1.22
SCAPERQ9BY12 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 AC136777.2-201ENST00000522979 358 ntBASIC7.44□□□□□ -1.22
SCAPERQ9BY12 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 FAM27B-201ENST00000610601 213 ntBASIC7.44□□□□□ -1.22
SCAPERQ9BY12 MIR6133-201ENST00000617057 108 ntBASIC7.44□□□□□ -1.22
SCAPERQ9BY12 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 AC004158.1-201ENST00000564508 4319 ntBASIC7.44□□□□□ -1.22
SCAPERQ9BY12 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 AC009951.1-201ENST00000623674 2614 ntBASIC7.44□□□□□ -1.22
SCAPERQ9BY12 AC068446.1-201ENST00000556425 1549 ntBASIC7.44□□□□□ -1.22
SCAPERQ9BY12 RNA5SP223-201ENST00000365174 120 ntBASIC7.44□□□□□ -1.22
SCAPERQ9BY12 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 TBCAP2-201ENST00000416175 326 ntBASIC7.44□□□□□ -1.22
SCAPERQ9BY12 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 TEX41-206ENST00000432608 661 ntTSL 3 BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 AC108751.3-201ENST00000461814 1020 ntBASIC7.44□□□□□ -1.22
SCAPERQ9BY12 AC005412.2-201ENST00000492004 341 ntBASIC7.44□□□□□ -1.22
SCAPERQ9BY12 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 AC073091.2-201ENST00000603205 907 ntBASIC7.44□□□□□ -1.22
SCAPERQ9BY12 AL121890.3-201ENST00000618494 516 ntBASIC7.44□□□□□ -1.22
SCAPERQ9BY12 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SCAPERQ9BY12 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SCAPERQ9BY12 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCAPERQ9BY12 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.43□□□□□ -1.22
SCAPERQ9BY12 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCAPERQ9BY12 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
SCAPERQ9BY12 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
SCAPERQ9BY12 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCAPERQ9BY12 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCAPERQ9BY12 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SCAPERQ9BY12 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCAPERQ9BY12 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCAPERQ9BY12 RN7SKP145-201ENST00000363291 303 ntBASIC7.43□□□□□ -1.22
SCAPERQ9BY12 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
SCAPERQ9BY12 RN7SKP263-201ENST00000411194 309 ntBASIC7.43□□□□□ -1.22
SCAPERQ9BY12 ATG4AP1-201ENST00000416893 538 ntBASIC7.43□□□□□ -1.22
SCAPERQ9BY12 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.43□□□□□ -1.22
SCAPERQ9BY12 CDC27P1-201ENST00000445384 715 ntBASIC7.43□□□□□ -1.22
SCAPERQ9BY12 AC011276.1-201ENST00000469688 323 ntBASIC7.43□□□□□ -1.22
SCAPERQ9BY12 RN7SL441P-201ENST00000492388 296 ntBASIC7.43□□□□□ -1.22
SCAPERQ9BY12 AC093840.1-201ENST00000511599 336 ntBASIC7.43□□□□□ -1.22
SCAPERQ9BY12 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC7.43□□□□□ -1.22
SCAPERQ9BY12 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC7.43□□□□□ -1.22
SCAPERQ9BY12 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SCAPERQ9BY12 AL161637.1-201ENST00000622380 412 ntBASIC7.43□□□□□ -1.22
SCAPERQ9BY12 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC7.43□□□□□ -1.22
SCAPERQ9BY12 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC7.43□□□□□ -1.22
SCAPERQ9BY12 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 DNM1P47-203ENST00000571780 12667 ntBASIC7.42□□□□□ -1.22
SCAPERQ9BY12 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 RNA5SP509-201ENST00000364577 119 ntBASIC7.42□□□□□ -1.22
SCAPERQ9BY12 SNORA37-201ENST00000384504 129 ntBASIC7.42□□□□□ -1.22
SCAPERQ9BY12 AL390316.1-201ENST00000406279 553 ntBASIC7.42□□□□□ -1.22
SCAPERQ9BY12 RPL31-204ENST00000409038 817 ntTSL 2 BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 RPL5P2-201ENST00000429598 854 ntBASIC7.42□□□□□ -1.22
SCAPERQ9BY12 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 IMPA1P1-201ENST00000510718 842 ntBASIC7.42□□□□□ -1.22
SCAPERQ9BY12 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms