Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CCDC28BQ9BUN5 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 AC007382.1-201ENST00000624376 2618 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 U3.3-201ENST00000362986 216 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 SNORA2.3-201ENST00000383920 135 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 RNA5SP122-201ENST00000384457 108 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 RNA5SP372-201ENST00000390836 115 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 MRPL48P1-201ENST00000445390 636 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 MYL12AP1-201ENST00000518490 515 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 AC005868.1-201ENST00000536421 331 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 GSTP1P1-201ENST00000548078 319 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 AC008126.1-201ENST00000549019 480 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 RBM22P1-201ENST00000578589 1214 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 AP005119.2-201ENST00000579735 1105 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 SNORA35B-201ENST00000607417 129 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 AL021368.1-201ENST00000607490 540 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 AP005432.2-201ENST00000608162 586 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 AC140113.4-201ENST00000622087 222 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 AC135068.12-201ENST00000637370 931 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 AL606537.1-201ENST00000607258 2011 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 AC005332.5-201ENST00000591222 2919 ntBASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC28BQ9BUN5 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 AC139713.2-215ENST00000641428 5037 ntBASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 RNA5SP335-201ENST00000363817 110 ntBASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 AL160275.2-201ENST00000412010 394 ntBASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 AL356968.2-201ENST00000412769 1257 ntBASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 CEACAMP8-201ENST00000413902 580 ntBASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 EEF1B2P8-201ENST00000414101 671 ntBASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 AC004448.2-201ENST00000422360 586 ntBASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 NMNAT1P2-201ENST00000435192 860 ntBASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 RPS26P2-201ENST00000440331 348 ntBASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 PCNPP2-201ENST00000441651 455 ntBASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 RN7SL51P-201ENST00000468230 285 ntBASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 RN7SL817P-201ENST00000480777 288 ntBASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 RPS27AP18-201ENST00000515536 459 ntBASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 AC005229.3-201ENST00000603438 323 ntBASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 IMMP1LP1-201ENST00000605170 488 ntBASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 LINC00901.1-201ENST00000617252 152 ntBASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 AC074101.1-201ENST00000637861 241 ntBASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC28BQ9BUN5 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms